Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1674 ATGAAAGAATACTCGATAGGGTTATTATTTCTTCATATTCTCCTACTCCTCCTATTTGGGTTCCCTGAATATTCAAGTTGCAATATGGGGTATCTCAATTCAGGTGTGTCCTCTTCAAGCCAAGTTCATGCTGCAGATGATGCACCTGCCAGTGGAGGTGGTCTCAGTCATAATGGCAAATTCAGTTATGGATATGCTAGCTGCGCCGGAAAGAGGTCTTCAATGGAAGACTTTTATGAAACAAGAGTTGATGGTGTGGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTGATCAGTCATCCAAAATTCATATCCGACACTAAATCTGCGATAGCTGATGCGTACAACCATACCGACTCAGAATTTCTGAAATCCGAAAATACTCATAACAGAGATGCTGGCTCAACTGCTTCTACTGCAATTCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAGCCAGACCAAACTGATGAGAGACAAAGGATTGAAGATGCAGGGGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTCGCCGTTTCTCGTGCATTTGGAGATAGGCTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCAAGGAAGAAAAGGTCGACAGCTCGCTCGAGTTTCTTATATTGGCAAGTGATGGCCTATGGGATGTTGTCTCAAATGAGGAAGCTGTGGCTATGGTGAAACCAATAGAGGATGCAGAGGAGGCAGCAAAGAAATTGTTGAAAGAAGCAATTCAGAGAGGAAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGGACCAAGGTGGTGCTTCTGCCTCTTCTAATGATACCACCACCTCTGCCAATTCTGTTACCCCGTCTCTGTAA 1002 0.4421 MKEYSIGLLFLHILLLLLFGFPEYSSCNMGYLNSGVSSSSQVHAADDAPASGGGLSHNGKFSYGYASCAGKRSSMEDFYETRVDGVDGEIVGLFGVFDGHGGVRAAEYVKKNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENTHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIKEEKVDSSLEFLILASDGLWDVVSNEEAVAMVKPIEDAEEAAKKLLKEAIQRGSADNITCVVVRFLMDQGGASASSNDTTTSANSVTPSL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1674 333 SMART PP2C_4 52 306 IPR001932 -
Ahy10g1674 333 SUPERFAMILY PP2C-like 57 308 IPR036457 -
Ahy10g1674 333 SMART PP2C_SIG_2 57 308 IPR001932 -
Ahy10g1674 333 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 31 328 - -
Ahy10g1674 333 CDD PP2Cc 61 308 IPR001932 -
Ahy10g1674 333 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Ahy10g1674 333 Gene3D - 54 312 IPR036457 -
Ahy10g1674 333 ProSiteProfiles PPM-type phosphatase domain profile. 62 308 IPR001932 -
Ahy10g1674 333 Pfam Protein phosphatase 2C 89 301 IPR001932 -
Ahy10g1674 333 PANTHER ALPHABET, ISOFORM E-RELATED 31 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1674 Ahy-Chr10 96028441 96032063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1674 29 331 PP2C-type Phosphatase Gene Family AT4G31750 84.488 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2111 20 118252864 118256522 Ahy10g1674 10 96028441 96032063 hybridization