Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1636 ATGGGGAGTGTTCATAAAAATTCAACAAAGAGTTCTGTTGAATTTGATGATTTGAGTTTTGAGTATAGTGGTTCTAGTGAAGAGAATGATATAAATATATCTCAAAAGAAGGGTACAATTGATGAAGCTATGAAAATGGTTGATCCTGGAGTTAGATTTGGTGAAGTTGAGAAGAAGTTAACTGAGTTGACCAAGGATGACATTTGGGGTATTGAGCATGAGAGTGTAGAGCAGTGTGTTCAATTCTACAAAAATTATGCCAAAGTACATGGTTTTTTTGCAAGGTGTGATGAAAAGGGTTATGATTTCAATGGCAACCTTAACATGAGACAAATGGTCTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCATAGGCTGATAACACGTGTAATGTGTCAAGCCAGAATTAGATTTCACTATGATATGAAATTGAAGAAGTGGAAAGTCACTGAATTTGAAGAGACTCACAATCATGACCTTATTCCACCTAAATATATACAGTTTGTCCCTGCATATCGCCAAAAGGGAGGACCTGGAAAAATTGATTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGAAAATTTACTTTGAAAGATAATAAACTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATCGATTATCAATGTTTTAGCGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAAGAACTAACCATCACGGTCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAAATTTTTCTTGAAATAATGGGTAATAAACTTCCAATAGCAGTGGTGACAGATGGTGATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAATGCACCAACTTTGTGCGTGGCATTTACATCGCAATGCGTGTGAAGCTATCAAAACTTCTGAGTTTCTTCATGGATTGAAGCACCTTATGACTACGTCACAATGTGAAGGAATTCATTCGTTGATAAAGCACTATATTGGTAAAAAATGTTATCTTCTGGATTTGATGCATAATCTTAACGAGGCAGCGAGGCAATATCGGACAAATGAACTATTATCTGATTTTAAGGCATTGTTCTCAAGTCCAGTTTTAACTACATGTTTCGAAGACATCGAAAAGGAAGCAGCCAATATTTTTACCCATAATATGTTTAAAGAGCCAACTATTGAATATAAGGTTCGGTATGATAGAGGCACTAACAACTTTGCTTGTGATTGTCGATTATTTGAGAGCCGTGGTATCCCTTGTTCCCATATTTTTTGTACTATGAGACATGACCATATTAGCACTATTCCCAATACTCTTATTCACAAGAGGTGGATGAAAGATGCTAAAAAAGAATACATTAGTTCACTTACTGCCGAAGATATTGAATCTGAAAAGATTGCTCGTGTTAGGTACGATGTTCTAGCGACGCTTTGTTTTTCACTATGTGATAAAGCATCGAAACATCGAGATGACTTCATGGAAATCAGAGAAGACATTTTTGGATTGATTATGAAACTCCATAAAAGACACAATCCAAATGAAAATCTTCCTTCTACCGCCAACTTGATAGGTGACCTAAGTGTTGTGAAGACAAAAGGAACCCCACAACAAACAACCAAGACTGCTAAGGCCCGTAAGTGTTCGCATTGTAAACGGATTGGTCATACGGTTCGTAGGTGTCCAAAACTATACGGTGGAGAATGCTCACTAAGTTTGAACGAAGATAAGTTGAATACTGACAATGACCAATCAAGTACATTCTGA 1947 0.3698 MGSVHKNSTKSSVEFDDLSFEYSGSSEENDINISQKKGTIDEAMKMVDPGVRFGEVEKKLTELTKDDIWGIEHESVEQCVQFYKNYAKVHGFFARCDEKGYDFNGNLNMRQMVCNREGTRRKKYLEMENRKRDHRLITRVMCQARIRFHYDMKLKKWKVTEFEETHNHDLIPPKYIQFVPAYRQKGGPGKIDFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNKLENLVWADGASIIDYQCFSDVLAFDTTYQKNKYNKPLVVFSRTNHHGQTCIFGCGLLADEKHETYVLVLKIFLEIMGNKLPIAVVTDGDLAMRGAIREVMPNAMHQLCAWHLHRNACEAIKTSEFLHGLKHLMTTSQCEGIHSLIKHYIGKKCYLLDLMHNLNEAARQYRTNELLSDFKALFSSPVLTTCFEDIEKEAANIFTHNMFKEPTIEYKVRYDRGTNNFACDCRLFESRGIPCSHIFCTMRHDHISTIPNTLIHKRWMKDAKKEYISSLTAEDIESEKIARVRYDVLATLCFSLCDKASKHRDDFMEIREDIFGLIMKLHKRHNPNENLPSTANLIGDLSVVKTKGTPQQTTKTAKARKCSHCKRIGHTVRRCPKLYGGECSLSLNEDKLNTDNDQSSTF* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1636 648 ProSiteProfiles Zinc finger SWIM-type profile. 456 492 IPR007527 GO:0008270
Ahy10g1636 648 SMART 26again6 467 494 IPR006564 GO:0008270
Ahy10g1636 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 70 365 IPR031052 GO:0006355
Ahy10g1636 648 SUPERFAMILY Retrovirus zinc finger-like domains 594 626 IPR036875 GO:0003676|GO:0008270
Ahy10g1636 648 PANTHER OS01G0607050 PROTEIN 70 365 - -
Ahy10g1636 648 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Ahy10g1636 648 PANTHER OS01G0607050 PROTEIN 377 539 - -
Ahy10g1636 648 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 377 539 IPR031052 GO:0006355
Ahy10g1636 648 Pfam MULE transposase domain 263 357 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1636 Ahy-Chr10 95034083 95036368 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1636 MULE 7.30E-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1636 - - ahf:112717754 1327.77