Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1627 ATGGAATCCAGTTTGTTCGTAATGATGCAAAGATCTAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGGAAAGTAAAATGGACCAAGGCGTATAGGCGGGTGCATGGAAAGGATATGACTCAGGATTCAACCTTTGAGTTTGAGAGAAAGCCAAATAGGCTAGAGAGATATGACAGGAATCTTGCGGAAAACATCCTCAAGGCCATTCCAAAGATTGAAAAGATCAGGGTCATCAGGGAGGAGAGGCACCATAAGAATAGGTGA 270 0.4259 MESSLFVMMQRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKPNRLERYDRNLAENILKAIPKIEKIRVIREERHHKNR* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1627 89 PANTHER RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED 9 89 - -
Ahy10g1627 89 Pfam Ribosomal protein L24e 10 43 IPR000988 -
Ahy10g1627 89 Gene3D Ribosomal protein L24e 3 47 IPR038630 -
Ahy10g1627 89 PANTHER 60S RIBOSOMAL PROTEIN L24 9 89 IPR000988 -
Ahy10g1627 89 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1627 Ahy-Chr10 94087235 94088192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1627 11 89 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 74.684 9.96e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1627 K02896 - gmx:100778077 158.303