Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1617 ATGAAGAGTCGAAGAGGAGCTGGGTTAGACAACGACGCTGAGGAGCTGTTTTCCTTGGCGAAGCAGAAGCAAGTCGCTCCTGAAGACTCTGACAACGAATCACAGGTTCCCAGGCCTCAGCCTGAACAAGAAGATAGCAGCGAGGAAGAAGAAGCAGCAACTTCATCTGACGAGGACGAAGACACAGACGAAGGCGAAGATGAACGTGAGAAACACGTGCTGGTTCCCAGGAAGCCTCAACCGCAAAAAGTTTTCAAACCCTCGTCATATTCTTCTAAACCCTCTCCAAAGTTGAAGTCTCAACCTTCGGCTTCTGTCAGTCAAACCAAATCCGGGTCAAAGCGCGCAGCCGAAAATAGTATCGACCACTCGAACCAACCAAAACGTGGGAAGAAGGCACAGGAGGATCACGCCGTCAGCTCCGTTGAAGAGGATCCGCAGAAATCCAAATCCCTCTTTCAGAGGATTTTCAGCAAGAAAGATGAGATAGGTATCTTGAAAGGCCTGTCTGAGTTCATCGCAAAAACAGGGAAGGAACCCTATAAATGCGCTGATGAATTTTACGAATTTATGAAGGGGTCGAATTTGATTCGGGCAAATGCATCATGCATGAAATTGAAGGAGAAGATCCGCCAGCTGAAGAAGAAGTTTGAGAACAACCTAGAAAAAGAGAAGAACGGCAAGGGGACAACCTTAAAGCCGCACGAGTTGGAAGCACTTCAGTTGGGAAAGAATGTTTGGGGCCACGATGGTTGTGGCGGTGAAACAGTGCTCAACGAAACTGCAAAAAAGGATACAGTTAATAATGAGAAGGCTGCGAAGATTACTTCCAAGAAGGCACTAGTGCCCCATTCAAATGAAAAAGCTGAAGCAAAGTCCAAACTAAATTCTGAACCTTTGGATTCAAATGAAGGTAGAAGGATGAGTGAATTTTCTGTGACTAGTTTAGCTTTGACTTCAATGTTGAGGTACGATGGGACTTTTGGTAAGCCTTTCAGTGAAGATTATATTAGAAAGGGAATAGAGTTACTTGGAGTCTCAAAGAGGGAAGACATCGAGGCTAGGTGCAAGAAGTTCAAAGACGCTGAAAATAAATTGTATGCGGAGATAGCTGAATTCTACGCCGAGCTAAGTTGA 1137 0.4529 MKSRRGAGLDNDAEELFSLAKQKQVAPEDSDNESQVPRPQPEQEDSSEEEEAATSSDEDEDTDEGEDEREKHVLVPRKPQPQKVFKPSSYSSKPSPKLKSQPSASVSQTKSGSKRAAENSIDHSNQPKRGKKAQEDHAVSSVEEDPQKSKSLFQRIFSKKDEIGILKGLSEFIAKTGKEPYKCADEFYEFMKGSNLIRANASCMKLKEKIRQLKKKFENNLEKEKNGKGTTLKPHELEALQLGKNVWGHDGCGGETVLNETAKKDTVNNEKAAKITSKKALVPHSNEKAEAKSKLNSEPLDSNEGRRMSEFSVTSLALTSMLRYDGTFGKPFSEDYIRKGIELLGVSKREDIEARCKKFKDAENKLYAEIAEFYAELS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1617 378 Coils Coil 196 227 - -
Ahy10g1617 378 PANTHER STOREKEEPER PROTEIN 31 372 - -
Ahy10g1617 378 Pfam Protein of unknown function, DUF573 153 248 IPR007592 GO:0006355
Ahy10g1617 378 MobiDBLite consensus disorder prediction 1 149 - -
Ahy10g1617 378 MobiDBLite consensus disorder prediction 44 66 - -
Ahy10g1617 378 MobiDBLite consensus disorder prediction 121 149 - -
Ahy10g1617 378 PANTHER BNAANNG10740D PROTEIN-RELATED 31 372 IPR007592 GO:0006355
Ahy10g1617 378 MobiDBLite consensus disorder prediction 84 120 - -
Ahy10g1617 378 MobiDBLite consensus disorder prediction 280 306 - -
Ahy10g1617 378 MobiDBLite consensus disorder prediction 281 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1617 Ahy-Chr10 93428436 93429987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1617 97 274 GeBP Transcription Factor Family AT4G00390 34.426 3.76e-17 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Ahy10g1617 DUF573 4.20E-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1617 - - adu:107458074 538.495