Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1612 ATGGAGAAACAAAAAAGCGAGGGTCCAAGTCTTGAAGATCCAAAATCACTTGCATTGCCTTCAAAACTCTCTCTCTCTCTCTCTCTCTCTGTTCCTTTTCAGGCTGCATCTTCATTCTTCATGTGTTGCAATTCCTCAAAAGACACACAACAAACATTGAAAATGAACCCTGTTCCTATGATTCTCTCCATGTTCCTGAACCTCCTTCTTCACCGTGCAGTTGCACAAGCACCACACCGCCCTCCTTTTCATTCTCCTGCACCCGCACCTGCACCTGCACCTGTTCCTGTTTCTCAACCCATTGCTCCACTTTTCACCTCCAATCCCATCCCTGCAGCTCTCTCTCCTGGATTTCAGGTTGGGGAACAACAACAGCACCGAAAAGGTTCACACAACAAAACGGTGGTTATATCTGTGGCCGTAGCCACCGGTGCAGTTGGTGCAGTTATTCTCACTTTGCTATGCTTCTGGATTTGCCATACCAAGCGTCCCTCAAAATCAAACAAGAAGAATCAAAGTCTTCACATCTCAGATACAGTGGAGAAAGGGCTCATAGGAATGAAGACGATTGGTATGAAAGGTTGTGCTCCAATCATTGATTATAAGGAAATAGAGAAAAGCACGAATAATTTTGACGAAAGTAACATCTTGGGTGAAGGAGGTTTTGGATGTGTTTACAAGGCTCATTTGGATGATAATCTTGTTGTTGCTGTTAAGAAGCTACACTGTCAAACTCAAAATGCTGAGAGAGAATTCGAGAATGAGGTCCAGTTGTTGAGCAAAATTCAGCATCCCAATATAATTCCTCTGCTGGCTTGTAGCATTAATGGGGACACCAGGTTCATCGTATATCAGTTGATGCAAAATGGATCCTTAGAAGCTCACTTACATGGATCTACTAGAGGGTCTGCATTGACTTGGAACATGAGGATGAAGATTGCTCTTGACACGGCAAGAGGATTAGAATATCTGCATGAGCATTGTCACCCTCCTGTCATCCATAGAGATATGAAATCTTCCAATATTCTTTTGGATGCAAACTTCAACGCTAAGCTATCTGATTTTGGGCTTGCCATAACTGATGGGTCCCAAAGCAAGAAGAACATTAAGCTTTCAGGCACATTGGGGTACGTAGCCCCAGAGTACCTTTTAGATGGGAAATTGACAGATAAAAGCGATGTGTATGCATTTGGGGTTGTACTTCTTGAACTTCTGTTAGGAAGGAAGCCTGTGGAGAAACTGGCACCAGCTCAATGCCAATCTATTGTCACATGGGCGATGCCGGCACTCACAGACAGATCCAAACTTAGGAACATTGTGGATCCAGTGATCAAAGATACAATGGATGTCAAGCACTTATACCAGGTTGCTGCTGTTGCTGTTCTCTGTGTTCAGCCTGAGCCAAGTTACCGTCCTCTAATCACTGATGTTCTTCATTCACTTGTCCCTCTTGTTCCCATTCATCTTGGAGGAACACTCAGATCTCATTGA 1491 0.4386 MEKQKSEGPSLEDPKSLALPSKLSLSLSLSVPFQAASSFFMCCNSSKDTQQTLKMNPVPMILSMFLNLLLHRAVAQAPHRPPFHSPAPAPAPAPVPVSQPIAPLFTSNPIPAALSPGFQVGEQQQHRKGSHNKTVVISVAVATGAVGAVILTLLCFWICHTKRPSKSNKKNQSLHISDTVEKGLIGMKTIGMKGCAPIIDYKEIEKSTNNFDESNILGEGGFGCVYKAHLDDNLVVAVKKLHCQTQNAEREFENEVQLLSKIQHPNIIPLLACSINGDTRFIVYQLMQNGSLEAHLHGSTRGSALTWNMRMKIALDTARGLEYLHEHCHPPVIHRDMKSSNILLDANFNAKLSDFGLAITDGSQSKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPALTDRSKLRNIVDPVIKDTMDVKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPIHLGGTLRSH* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1612 496 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Ahy10g1612 496 Pfam Protein kinase domain 212 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1612 496 PANTHER BNAA04G14780D PROTEIN 109 495 - -
Ahy10g1612 496 CDD STKc_IRAK 217 484 - -
Ahy10g1612 496 SUPERFAMILY Protein kinase-like (PK-like) 195 481 IPR011009 -
Ahy10g1612 496 SMART serkin_6 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1612 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 332 344 IPR008271 GO:0004672|GO:0006468
Ahy10g1612 496 Gene3D Phosphorylase Kinase; domain 1 177 285 - -
Ahy10g1612 496 PANTHER OS01G0750732 PROTEIN 109 495 - -
Ahy10g1612 496 Gene3D Transferase(Phosphotransferase) domain 1 287 486 - -
Ahy10g1612 496 ProSiteProfiles Protein kinase domain profile. 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1612 Ahy-Chr10 93258915 93262683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1612 168 485 Receptor kinase-like Gene Family AT3G58690 45.370 4.44e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Ahy10g1612 Pkinase 1.10E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1612 - - ahf:112784689 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2058 20 116106678 116110416 Ahy10g1612 10 93258915 93262683 hybridization
Ahy16g3169 16 148013799 148020760 Ahy10g1612 10 93258915 93262683 PCT
Ahy6g2469 6 109492140 109498466 Ahy10g1612 10 93258915 93262683 PCT
Ahy10g1612 10 93258915 93262683 Ahy16g3169 16 148013799 148020760 PCT
Ahy10g1612 10 93258915 93262683 Ahy6g2469 6 109492140 109498466 PCT