Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1596 ATGAAGAAGCAAGGGTGTGAGGTTGAAGCAATAGGCATCAACTACAAGATTTGCACAGGCACAACAGAGCAAACTTTCAAGATCTTCAGAAAACCTCCACAACTGAATAATGAAGAACATGGAGAGGCACCAGAACCAGCAGAGGAAGCAAGAACTAATGATCACAGATCATTCTGCAGCAGAGTTAGGCACATTCTCTGGGATGTGAACTGCGTGGCGAAGCCGTCGGAAGTTCTGGCAGTTGTTGGTCCAAGTGGGGCTGGAAAATCATCCCTCCTTGAGATTCTTGCCGGCAAAGTTTGTCCGACAAAAGGGTCTATCTTGGTGAACAAGAAACCTGTAGATAAAGCACAGATCAGGAAGAATTCGGGGTATGTAACACAAAAAGATATCTTATTTCCATTACTTACGGTTGAAGAAACATTGATGTTTAGTGCAAAGTTAAGGCTGAATCTTCCTAAGCAACAACTATGCTCCAGAGTGAAGTCACTGATTCAGGAACTTGGTCTTGGCCATGTTTCTAGGACTAGAGTCGGAGATGAAAAGGTTCGTGGAATATCCGGTGGCGAGAAGCGCCGCGTTTCAATTGCCATAGAAGTAGTACATGATCCAAAAGTGCTGATTCTGGATGAACCAACTTCAGGCCTCGACAGTACTAGTGCAATGCAGATAATTGGTATGCTAAAAGTCATGTCCGAATCGAGGGGACGAACTATAATCTTCAGTATCCATCAACCTGGGTTCAGAATAGTGAAAATGTTCAATTCAATATTGTTGTTAGCCAATGGCTCTGTGTTGCACCATGGCACTGTGGATTTGCTAGGTGCGAATCTAAGGTTAATGGGTTTAGAGCTTCCTCTTCATGTTAACGTAGTTGAATTCGCCATTGAGTCCATTGATACCATTCAGCAGCAACAAAAATGTGAAGAAGATCAGCAGCAAGTGCCACAAAGATTGCGAGGAACTGCACCACGGAAGAAAGGCAATGATCGAGGCGAGAGTAGAAGTGGTAGGTTTACTCTGCAGCAGCTCTTTCAACAATCCAAGGTAACTGATGTTGGAATGATAAATGAGGAAATGGATTTCACTTGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATTATTCTCACTCATAGGTTTGCCAAAATCATTCTTCGCACGAAGGAGCTCTTCGCATGTAGGACAGTTCAGATGCTGATTTCTGGGCTGGTTTTAGGCTCTGTCTTTTGTCATCTCAAGGAAGGTCTAGAAGGAGCACAAGAAAGGGTTGGTCTATTTGCTTTCATACTAACATTTTTGTTATCATGCACGACAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAGGGAAACCTCTAGTGGAAGCTATAGAGTATCATCCTATGCTATTGCCAATGCCTTAGTTTTCTTGCCATTTCTACTCATTCTTGCCATTTTATTCACAATGCCCTTATATTGGCTCGTTGGCCTAAACAAGAACTTCGCAACATTCTTGAACTTCTTGTTGATAATTTGGCTAATTCTTTACACGGCGAATTCCGTGGTGGTGTGTTTCAGTGCTCTGGTGCCAAACTTCATTGTTGGGAATGCAGTGATTTCTGGTGTCATTGGTTCATTCTTTTTGTTCTCTGGTTACTTCATATCAAAATATGAGATTCCTAAGTACTGGATTTTCATGCATTATGTGTCTCTATACAAGTATCCTTTTGAAGGCTTTCTAATAAATGAGTTCTCCAACTCAAAGAAATGCTTGGAATACATGTTTGGGGCATGTTTGGTAAAGGGAGAAGACGTGCTTAAAGAAAAAGGGTATGGTGGGGAAAATAGTAGATGGAAGAATCTTGGAATGATATTGTGCTTTATCTTAATCTACAGGTTCATTTCTTATGTATTTCTTAGATATAGATGCTCGAAGAGCATCATCATCTAA 1944 0.412 MKKQGCEVEAIGINYKICTGTTEQTFKIFRKPPQLNNEEHGEAPEPAEEARTNDHRSFCSRVRHILWDVNCVAKPSEVLAVVGPSGAGKSSLLEILAGKVCPTKGSILVNKKPVDKAQIRKNSGYVTQKDILFPLLTVEETLMFSAKLRLNLPKQQLCSRVKSLIQELGLGHVSRTRVGDEKVRGISGGEKRRVSIAIEVVHDPKVLILDEPTSGLDSTSAMQIIGMLKVMSESRGRTIIFSIHQPGFRIVKMFNSILLLANGSVLHHGTVDLLGANLRLMGLELPLHVNVVEFAIESIDTIQQQQKCEEDQQQVPQRLRGTAPRKKGNDRGESRSGRFTLQQLFQQSKVTDVGMINEEMDFTCEFANSRLRETIILTHRFAKIILRTKELFACRTVQMLISGLVLGSVFCHLKEGLEGAQERVGLFAFILTFLLSCTTEALPIFLQEREILMRETSSGSYRVSSYAIANALVFLPFLLILAILFTMPLYWLVGLNKNFATFLNFLLIIWLILYTANSVVVCFSALVPNFIVGNAVISGVIGSFFLFSGYFISKYEIPKYWIFMHYVSLYKYPFEGFLINEFSNSKKCLEYMFGACLVKGEDVLKEKGYGGENSRWKNLGMILCFILIYRFISYVFLRYRCSKSIII* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1596 647 Gene3D - 54 324 IPR027417 -
Ahy10g1596 647 MobiDBLite consensus disorder prediction 309 335 - -
Ahy10g1596 647 MobiDBLite consensus disorder prediction 33 52 - -
Ahy10g1596 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 50 287 IPR003439 GO:0005524
Ahy10g1596 647 Pfam ABC transporter 68 214 IPR003439 GO:0005524
Ahy10g1596 647 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524
Ahy10g1596 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 639 - -
Ahy10g1596 647 Pfam ABC-2 type transporter 244 319 IPR043926 GO:0140359
Ahy10g1596 647 SMART AAA_5 75 264 IPR003593 -
Ahy10g1596 647 Pfam ABC-2 type transporter 374 582 IPR013525 GO:0016020|GO:0140359
Ahy10g1596 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 639 - -
Ahy10g1596 647 MobiDBLite consensus disorder prediction 32 52 - -
Ahy10g1596 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1596 Ahy-Chr10 92577399 92579845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1596 64 292 Calmodulin-binding Proteins AT2G36910 27.500 2.17e-15 78.6