Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1581 ATGCCCACTTGGTGGAGTAAAAAGTCCAGCAAGTCCAAGCAGCAGCAGCAAGAACTGCAGCAGCCACATCAGCATGGAGGAGGAGGAGTTCGTCAATTCACCTTCACCAGATCAAACAACAACGTTTCTTCTTCTCTTTCACCTCCCAGTAAGGCCAAATCCGACAAGCCCAATCACAGCTTCGACGAAACCCTCTCCCGCAACTCACCAAGGGTCAGCAGAGACTTCTCTTCTACCCCCGCCGTAGCTTCCTCCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGCTCATCCTCCGGATTCTCATGCTTCGATTCCGACGGCGACAAGAGAGGCCACCCCTTGCCTCGCCCCTCTGTCTCCTCCACCCAAAGCTTCGGCAACGACCAAGGCCTTGTATTCGGATCTGCCTCCGTCTCTGGTTCCAGCGTTAGTTCCACGGGCTCCGTTGATGATCAACAACCCACCTCTCGATACACTCGTATAGATGCAACCAGAGGACAAAGTGACATAAAGTTCAATGCAAGGTCAAAAAGCCCGGGTCCTGGTTCAAGAGGGCCCACCAGCCCTACATCACCGCTTCATCCGAGGTTACATGTTTTGAGTCTTGACTCCCCTACATGCAGGCAAGAAGATGGAAAGAGTGAGTGTCATCCGTTGCCTCTTCCGCCGGGTTCTCCAACTAGTCCTTCTTCTCTTTCCAATTCCAACACAAAACCAAATGGACTTCCAGAAAACACCACATGTAATCCATCCAAGTGGAAGAAAGGAAAGCTGCTAGGACGGGGTACATTTGGGCATGTATATGCTGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAGGGTTGTTTGTGATGATCAAACATCAAAAGAGTGCTACAAACAACTTAATCAGGAGATACTCTTGCTTAGTCAGCTTTCACATCCGAATATTGTTCAATACTATGGGAGTGACTTGGGAGAAGAAACACTTTCAGTTTATTTAGAATATGTTTCCGGTGGTTCGATTCATAAATTACTTCAGGAATATGGGGCCTTTAAGGAGCCTGTTATTCAAAATTATACTAGGCAGATTGTCTCTGGACTTGCCTATCTTCATGGTAGAAATACAGTGCACAGGGATATCAAGGGGGCTAACATACTAGTTGATCCAAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATGCTTCTTCCTCAATGCTTTCTTTCAAAGGAAGTCCATACTGGATGGCCCCTGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCGACATCGAAGCCTCCTTGGAGTCAATATGAAGGGGTAGCAGCAATATTCAAAATTGGTAACAGCAAAGATATGCCTGAACTTCCTGAGCATCTGTCGAATGAGGCAAAGAACTTCATCCAGTTATGCTTACAAAGAGATCCATTGGCTCGCCCAACAGCTCAAATGCTGCTAGATCACCCATTTATTCGAGATCAGTCGGCAACAAGAGCTGCAAATGTCAGCATAACCAGGAGTGCTTTCCCCTATATGCTTGATGGGAGCCGGACACCGCCACCTGAGATTTTTTCAAATAAAACAAATGCAACTTCATTTGATGGAGACTATGCAACAAGGGCAGCCCCTCCAGCCTCGCGGGCTGTAAGGAACCAAAGAGATAACTCAAGAATGATCACATCATTACCCGTATCTCCTTGTTCAAGTCCATTGCGGCAGTATGGATCAGCACACAAGAGCTGTTTCCTTTCACCTCCTCATCCAACTTACACATTGATGGGACAAAATACCCTCCCGTCATATCCGTTGAGATCGAATGCCGCCTTCACTCTTGATCCTTGGCACGAAACATCTCCATACAGATCCCACCACACACCTGGTGGATCCCCAAGATCGAGACTCATTTGA 1962 0.4725 MPTWWSKKSSKSKQQQQELQQPHQHGGGGVRQFTFTRSNNNVSSSLSPPSKAKSDKPNHSFDETLSRNSPRVSRDFSSTPAVASSAAAAAAAAGGSSSGFSCFDSDGDKRGHPLPRPSVSSTQSFGNDQGLVFGSASVSGSSVSSTGSVDDQQPTSRYTRIDATRGQSDIKFNARSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTCRQEDGKSECHPLPLPPGSPTSPSSLSNSNTKPNGLPENTTCNPSKWKKGKLLGRGTFGHVYAGFNSENGQMCAIKEVRVVCDDQTSKECYKQLNQEILLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINASSSMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPELPEHLSNEAKNFIQLCLQRDPLARPTAQMLLDHPFIRDQSATRAANVSITRSAFPYMLDGSRTPPPEIFSNKTNATSFDGDYATRAAPPASRAVRNQRDNSRMITSLPVSPCSSPLRQYGSAHKSCFLSPPHPTYTLMGQNTLPSYPLRSNAAFTLDPWHETSPYRSHHTPGGSPRSRLI* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1581 653 CDD STKc_MEKK1_plant 252 509 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 1 253 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 31 54 - -
Ahy10g1581 653 Gene3D Transferase(Phosphotransferase) domain 1 250 529 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 228 252 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 116 163 - -
Ahy10g1581 653 SUPERFAMILY Protein kinase-like (PK-like) 251 594 IPR011009 -
Ahy10g1581 653 PANTHER MAP KINASE KINASE KINASE 1 634 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 63 84 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 1 23 - -
Ahy10g1581 653 SMART serkin_6 253 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1581 653 Pfam Protein kinase domain 254 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g1581 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 634 - -
Ahy10g1581 653 MobiDBLite consensus disorder prediction 169 190 - -
Ahy10g1581 653 ProSitePatterns Protein kinases ATP-binding region signature. 259 282 IPR017441 GO:0005524
Ahy10g1581 653 ProSiteProfiles Protein kinase domain profile. 253 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1581 Ahy-Chr10 91902941 91908117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1581 1 571 MAP Kinase Kinase Kinase AT1G53570 55.822 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy10g1581 Pkinase 6.80E-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1581 K04421 - gmx:100813122 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2017 20 114180592 114186355 Ahy10g1581 10 91902941 91908117 hybridization
Ahy13g3060 13 122876501 122881742 Ahy10g1581 10 91902941 91908117 PCT
Ahy3g2733 3 120357133 120362361 Ahy10g1581 10 91902941 91908117 PCT
Ahy13g2825 13 112229064 112236263 Ahy10g1581 10 91902941 91908117 PCT
Ahy3g2498 3 109522349 109529515 Ahy10g1581 10 91902941 91908117 PCT
Ahy10g1581 10 91902941 91908117 Ahy13g3060 13 122876501 122881742 PCT
Ahy10g1581 10 91902941 91908117 Ahy3g2733 3 120357133 120362361 PCT