Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1555 ATGGAAACAAACCACCGCAACACTATTTGCACATTCACAGATATTGATATCACTAATTGGAACAATAATGATCTTCCTCATCATGATTATGATGAAAATAAGATCATGGAAACAAAACAAGAAGAAGATCATAACAACCTCACTACTCTCAATGATAACCAAATTCCTCTTATGTCCTGGCCCAACCTTCAACAACAAAGACCAGCAATACTCTCACCGTCATCCTCATCTTTTAGAACCTTCTTTAGTGACATAATAGGGAACCAAGTGCAAGAAGTCAAAGACGAAGAGGCTGAAGAAGAATTAGGAGTGATGAAGGAGATGATGTACAACATCGCCGCTATGCAACCGGTGGACATCGACCCGGCTAGCGTTCGAAAGCCGAGGAGGCGAAACGTGCGCATAAGCGACGACCCTCAGAGCGTGGCAGCGCGTCACAGAAGGGAGAGGATCAGTGAGAGGATCCGAATCCTTCAGAGGTTAGTTCCAGGTGGCACCAAAATGGACACCGCTTCCATGCTCGACGAAGCCGTTCGATATGTTAAGTTCTTGAAGCGCCAAGTCAGGTTCCTCGAATCAAATCCAAATCAACTACCACCTAATTGGCCTTTTGCACCACTACTTACTATTAATAATTTGCTTCACGCTCCTTCTGCTGCTGCCGCCACTTCCATGCCACCGCCACCGCCGCCGCCGGGGCTACCCGGATTTGGAACCCTAAGCAGCCATGGCCATCATGATTAG 744 0.4704 METNHRNTICTFTDIDITNWNNNDLPHHDYDENKIMETKQEEDHNNLTTLNDNQIPLMSWPNLQQQRPAILSPSSSSFRTFFSDIIGNQVQEVKDEEAEEELGVMKEMMYNIAAMQPVDIDPASVRKPRRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAVRYVKFLKRQVRFLESNPNQLPPNWPFAPLLTINNLLHAPSAAAATSMPPPPPPPGLPGFGTLSSHGHHD* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1555 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 32 204 - -
Ahy10g1555 247 MobiDBLite consensus disorder prediction 222 236 - -
Ahy10g1555 247 Pfam Helix-loop-helix DNA-binding domain 145 184 IPR011598 GO:0046983
Ahy10g1555 247 Coils Coil 174 194 - -
Ahy10g1555 247 Gene3D - 138 203 IPR036638 GO:0046983
Ahy10g1555 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 32 204 IPR045843 GO:0003700|GO:0006355
Ahy10g1555 247 SMART finulus 141 190 IPR011598 GO:0046983
Ahy10g1555 247 MobiDBLite consensus disorder prediction 220 247 - -
Ahy10g1555 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 135 184 IPR011598 GO:0046983
Ahy10g1555 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1555 Ahy-Chr10 90864413 90865334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1555 102 200 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 84.848 9.80e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy10g1555 HLH 1.00E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1555 - - aip:107620984 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1992 20 113094525 113095369 Ahy10g1555 10 90864413 90865334 hybridization
Ahy13g3080 13 123691340 123692654 Ahy10g1555 10 90864413 90865334 PCT
Ahy3g2749 3 120862979 120863780 Ahy10g1555 10 90864413 90865334 PCT
Ahy10g1555 10 90864413 90865334 Ahy13g3080 13 123691340 123692654 PCT
Ahy10g1555 10 90864413 90865334 Ahy3g2749 3 120862979 120863780 PCT