Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1501 ATGGCTACTCCCACCTCAGATTTCATGTTATCTGATTATCTATTGCTTGATGGTGATGTTATTATTGATAATCATCATCAACATCAAGATCAAGACTCTTGGTCACAGAGTACTGAATCATCTTCGTTGGCAGCAGCATCAAGCAATGTCAATCACGAATTTGGTGGTGCAACAACCTCCAACCACAATAACAACATGCAACTTTTGGATTTTGTTGACAGAAAATGCAAAACTTATGTGAGTAAGCGAAACAAGCAGGTAGAAGCGAGGCAAAGGGTGGTGTTCAGAACTAGATCGGAGCTAGAGGTCATGGATGATGGATTTAAATGGAGGAAGTATGGAAAGAAGTCAGTAAAGAACAGTCCCAATCCTAGGAACTATTACAAGTGCTCGAGTGTAGGATGCGGTGTGAAGAAAAGAGTGGAAAGGGATGCAGAAGACAGGAGCTATGTGTTAACAAGTTATGACGGTGTTCACAATCACCAAATCCCTTCTTCTAACTCCTACTACACTACTTCTCCATTCTCCATCTTCCATTCTAATGATATTAATTGGTCCCTCCATGCTCTTGCTGCAAACTCATCATCCTCTAATTCCTAG 600 0.41 MATPTSDFMLSDYLLLDGDVIIDNHHQHQDQDSWSQSTESSSLAAASSNVNHEFGGATTSNHNNNMQLLDFVDRKCKTYVSKRNKQVEARQRVVFRTRSELEVMDDGFKWRKYGKKSVKNSPNPRNYYKCSSVGCGVKKRVERDAEDRSYVLTSYDGVHNHQIPSSNSYYTTSPFSIFHSNDINWSLHALAANSSSSNS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1501 199 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy10g1501 199 MobiDBLite consensus disorder prediction 33 47 - -
Ahy10g1501 199 MobiDBLite consensus disorder prediction 27 47 - -
Ahy10g1501 199 SUPERFAMILY WRKY DNA-binding domain 96 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy10g1501 199 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy10g1501 199 Gene3D WRKY domain 91 157 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy10g1501 199 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 5 167 - -
Ahy10g1501 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 167 IPR044810 GO:0003700
Ahy10g1501 199 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1501 Ahy-Chr10 85787967 85790914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1501 88 190 WRKY Transcription Factor Family AT5G64810 63.107 4.05e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy10g1501 WRKY 4.80E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1501 - - aip:107621044 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1756 17 43480973 43484802 Ahy10g1501 10 85787967 85790914 hybridization
Ahy16g3100 16 146827929 146833955 Ahy10g1501 10 85787967 85790914 PCT
Ahy6g2410 6 108479353 108485504 Ahy10g1501 10 85787967 85790914 PCT