Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1480 ATGCGTGATCCCGGAAAGCGTCCGCAAATTTGGAATTATCCTATCAATCAACAAGATGAAATCCGTAGAGCATACATAAAGTTTGGACCATATCAATTTATTATGGATGAGTACCCTCTTTCTGGTCTAGAAAGTCATCCTCGTCGTTTCAAAGCTCATTGGTTTAAGAGTTTTTCTTGGCTAGAATATTCGCCAGAAGTGGATGCTGCATTTTGTCTTTCATGCTATTTATTTTCTAGAAAATCAAGTCCATTCACATCAGGAGGATTTCGCAATTGGAAAAAAGTGAATAATGGAAAGGATTGTGCATTTTTATCTCATGTGGGTAAATCTCTTAATTCTCCTCATAATATTGCTGTTAAGTCTTGTAAAGATTTGCTTAATCAATTATGTCACATTGACAAAGTATTGGCTAAGCAAAGCTCACAACAAGTTTTAAGCAATAGATTGCGTCTTAAAGCCTCTATTGATACTGTCAAATGGTTAACGTTTCAAACTTGTGCTTTTAGGGGACATGACGAGAGTCATGAGTCTCAGAATCGAGGAAATTTTCTTGAAATGTTAAAATTATTAGCTTCTTACAATAAAGAAGTGGATGCAGTTGTTTTGGATAATGCTCCTCAAAATGCAATATACACATCACCTTCTATTCAAAAGGAAATTCTACATGTTTTTGCTAGAAAGGTGCAAAATGAAATTCGCAATGAGATTGGTAATGCAAAGTTTTGTTTGATTGTTGATGAAGCTAGAGATGAATCTAGAAGAGAACAAATGGCAGTTGTTGTTAGATTTGTTGATAAGCATGGATTTGTCAAAGAAAGGCTAATAGATGTTGTTCATGTCAAAGATACTACTTCTGCTACTCTAAAACAAGAGATTTGTTCTGCATTATCTCATCACAATCTCAACATTCAAAATGTTCGAGGTCAAGGGTATGACGGAGCTAGTAATATGCGTGGAGAGTGGAAAGGGTTACAAGCTTTAATTATTCAAGAATGTCCTTATGCATATTATGTTCATTGCTTTGCTCATCAATTACAGCTAGCTCTTGTTGCTGCGGCTAAAGAAGTTGTTGATGTTCATGCTTTTTTCCAAAGTTTGAGTAATATTATCAATGTTGTGTGCTCTTCTTGCAAACGCAATGATGAATTACGATCTGCTTATGCAACTGAAATTTCCCATTTAGTTGCAACTAATCAAATTGAAACAGGAAGAGGAGCAAATCAAATTGGCACATTAAAAAGATCAGGAGATACCAGGTGGAGCTCTCACTTCAACTCAATTTGTAGCCTTTTACGTATGTTTGGAGCAACAACTTCAGTTCTGGAAGATTTGGCTACTAATGGATCTACATATTCTCAACGTGGTGATGCTACTTATGCTCTTAAATCTTTATTATCATTTGATTTTGTTTTCATTTTGCATATGATGAAAGAAATCATGGGAATCACTGATAAACTTTGTCAAGCATTGCAACAAAAATCTCAAGACATTTTGAATGCTATGCATCTGGTTTCTAGTACAAAGTCATTGATTCAACAGTTAAGAGATAGTAGTTGGGGAGCACTTTTGGAGAAAGTTAGTTCTTTCTGCAATGATCATGCTATTCAGATACCTGATATGGGTGCTTCTTTTAGTGACATAATTCGGTCTCGTCGTAAAAAGGATGTTGTCACTGTTGAACACCACTATCGTGTTGACATTTTTACTAGCGTGATAGATTTTCAATTGAAAGAGCTAAATAGTAGATTTAGTGAGCAAGCAACCGAGCTCCTCATACTGAGTACATCTCTAGATCCTAAAGATGCTTTCAAGTTATTCAGTGAAATTCTCATATGCTCGTCTTGTACAAATGAAGTATTACTTCCTGATGGCACACATATAGATAAGGTGCTTGTTCATGATAAGAAGAGCTTGTGTATGAAGTCAGACATGAAGATCACCTTGGTATTTGATGTTTTAGAAGAGGATTCTAATGAATTTGCTGATATGGATCTTCGACCATATTTTAGTTCTAGGCTTATTAATTTCTCCAATATGCATCCTGAGTTTGCACAATACAAACAATCATATGAAATTGTTATACACCTTTAG 2094 0.352 MRDPGKRPQIWNYPINQQDEIRRAYIKFGPYQFIMDEYPLSGLESHPRRFKAHWFKSFSWLEYSPEVDAAFCLSCYLFSRKSSPFTSGGFRNWKKVNNGKDCAFLSHVGKSLNSPHNIAVKSCKDLLNQLCHIDKVLAKQSSQQVLSNRLRLKASIDTVKWLTFQTCAFRGHDESHESQNRGNFLEMLKLLASYNKEVDAVVLDNAPQNAIYTSPSIQKEILHVFARKVQNEIRNEIGNAKFCLIVDEARDESRREQMAVVVRFVDKHGFVKERLIDVVHVKDTTSATLKQEICSALSHHNLNIQNVRGQGYDGASNMRGEWKGLQALIIQECPYAYYVHCFAHQLQLALVAAAKEVVDVHAFFQSLSNIINVVCSSCKRNDELRSAYATEISHLVATNQIETGRGANQIGTLKRSGDTRWSSHFNSICSLLRMFGATTSVLEDLATNGSTYSQRGDATYALKSLLSFDFVFILHMMKEIMGITDKLCQALQQKSQDILNAMHLVSSTKSLIQQLRDSSWGALLEKVSSFCNDHAIQIPDMGASFSDIIRSRRKKDVVTVEHHYRVDIFTSVIDFQLKELNSRFSEQATELLILSTSLDPKDAFKLFSEILICSSCTNEVLLPDGTHIDKVLVHDKKSLCMKSDMKITLVFDVLEEDSNEFADMDLRPYFSSRLINFSNMHPEFAQYKQSYEIVIHL* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1480 697 Pfam Domain of unknown function (DUF4371) 85 324 IPR025398 -
Ahy10g1480 697 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN 112 630 - -
Ahy10g1480 697 SUPERFAMILY Ribonuclease H-like 239 606 IPR012337 -
Ahy10g1480 697 SMART 2118neu4 46 139 IPR006580 -
Ahy10g1480 697 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN-RELATED 112 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1480 Ahy-Chr10 84276484 84301580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1480 621 683 Core DNA Replication Machinery Family AT2G31270 36.364 4.92e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1480 - - ahf:112696654 1204.5