Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1468 ATGACTTTCAAGCGCAGGAACGGAGGAAGAAACAAGCATGGCCGTGGCCACGTCAAATTCATTCGCTGCTCCAATTGCGGCAAGTGTTGTCCCAAGGACAAATCAATCAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAGGCTGCAGTTCGTGATGTTCAGGAAGCCTGTGTCTATGAGCAATACACTCTTCCGAAACTGTATGTGAAGATGCAGTATTGTGTTTCGTGTGCTATTCACTCTCACGTTGTGAGGGTACGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCGCAGCGCTTTGCTAGGCGCAGGGATGATGCGCCAAGGCCCGGTCAACCTGGTCAAGCTCCTCGTCCTGCTGGAGCTGGAGCTGCCCCTCGTGTTTAA 390 0.5205 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRPAGAGAAPRV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1468 129 MobiDBLite consensus disorder prediction 86 129 - -
Ahy10g1468 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy10g1468 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Ahy10g1468 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy10g1468 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Ahy10g1468 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 - -
Ahy10g1468 129 MobiDBLite consensus disorder prediction 89 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1468 Ahy-Chr10 83342785 83344088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1468 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 6.18e-70 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1468 K02976 - gmx:100305706 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1890 20 104933873 104935141 Ahy10g1468 10 83342785 83344088 hybridization