Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1460 ATGATGTCGTTCTCGCACCACCGTCGAACTCAATCGGAGCTTCATGTCCGAATCCCCGACGAATTTGATCTTGATCTCGATATGGATGTGGATTTGGATGTTGATTCCTTTGATTTCAAAAATTCCATTCATAACAACGAAACCGTCATCTCTTCCTCCTCATCTTCCGTAGCAGCCGAATCCCTCTCTAAGCCCGTATCCGACCACCAACTACCTCCGTTCTCACCTGCCTCTACCACCATGCCGCCCATTGTGGATATCAGTAAAACCACCGTGAGGCCTGGTCACCGGCGCAGCAACTCGGCAGACGGCACCTCTTCTTCTTCATTGTTGTTGGAAGGCATTGAGGCCAAGAAGGCCATGTCCCCTGACAAGCTCGCTGAATTGTGGACTGTTGATCCCAAGCGAGCCAAGAGGATTTTGGCCAACCGTAAATCAGCGGCCCGCTCAAAGGAGAGGAGAGCTTGTTATGTGGTGGAGCTTGAGAGAAAAATTCAGGTTCTTCAAACAGAAGCAACTACTCTTTCAGCCCAATTAAATCTTTTTCAGAGAGATACAACTGGTTTGACTACTGAAAATACTGAACTTAGGCTACGCTTACAAGCTATGGAGCAACAAGCTAAGTTATGTGATGCTCTGAATGAAGCACTGAAAAAAGAAGTTGATAGACTCAAGATTGCTACTGGAGAGATGGTAACTCGTCCCAATTCGAATAGTTTGGCAATGCATCGGCCTTCATATTCTCAAGCTCCTTTCTTCTCGTTTCAACCGCAACATTTTGCAGGCGAACTTCACACCATGCAAATGCCTCCTTTGCATCCACTGTCGCCTAATATGTCTTCCCCTCGACCGCTGATTGATGTAACTACTCCATACAATTTGTCAAACATGTTGCCAAGTGATCATGTTCCTGTTGGCCAATTTCAGGTGCTAGACATAAGTCATCCGATCCCTCATGTTCTGATTCATGATGGTCCCTCCATTTCTGTTAATAAAATCAACGATGCCTTTTGA 1014 0.4596 MMSFSHHRRTQSELHVRIPDEFDLDLDMDVDLDVDSFDFKNSIHNNETVISSSSSSVAAESLSKPVSDHQLPPFSPASTTMPPIVDISKTTVRPGHRRSNSADGTSSSSLLLEGIEAKKAMSPDKLAELWTVDPKRAKRILANRKSAARSKERRACYVVELERKIQVLQTEATTLSAQLNLFQRDTTGLTTENTELRLRLQAMEQQAKLCDALNEALKKEVDRLKIATGEMVTRPNSNSLAMHRPSYSQAPFFSFQPQHFAGELHTMQMPPLHPLSPNMSSPRPLIDVTTPYNLSNMLPSDHVPVGQFQVLDISHPIPHVLIHDGPSISVNKINDAF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1460 337 MobiDBLite consensus disorder prediction 61 85 - -
Ahy10g1460 337 Coils Coil 200 220 - -
Ahy10g1460 337 Gene3D - 134 186 - -
Ahy10g1460 337 Coils Coil 158 178 - -
Ahy10g1460 337 SMART brlzneu 131 195 IPR004827 GO:0003700|GO:0006355
Ahy10g1460 337 SUPERFAMILY Leucine zipper domain 135 189 IPR046347 GO:0003700|GO:0006355
Ahy10g1460 337 CDD bZIP_plant_RF2 136 185 IPR044759 GO:0003700|GO:0006355
Ahy10g1460 337 Pfam bZIP transcription factor 135 189 IPR004827 GO:0003700|GO:0006355
Ahy10g1460 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 133 196 IPR004827 GO:0003700|GO:0006355
Ahy10g1460 337 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 3 333 - -
Ahy10g1460 337 PANTHER BZIP TRANSCRIPTION FACTOR 18 3 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1460 Ahy-Chr10 82675494 82678444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1460 6 231 bZIP Transcription Factor Family AT2G40620 56.410 1.71e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy10g1460 bZIP_1 1.10E-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1460 - - adu:107470204 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1873 20 103842319 103845089 Ahy10g1460 10 82675494 82678444 hybridization