Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1451 ATGTCCTCCGAAGACATAGGTCTCGTACCCGACCAGAGGATCGAAACTGGTCTCAGCTCCTCACTCGTTTTTCAAGACGAAACCTTGCGCTTCAGCTGCGGGGGCCCGCAGCGTCGGGTCGGGGACCCGGGCCCGAAGACCCGGGATCTTGGTGGGTTCATCGATGACAAGATGTTCTCCATGGAGCGCGACCGGTACTTCGCCGCACAGAGCTCTGAGTTCCGCCGGAGCGTCTACGGCGACTGCTCCGGCCGCCGTGATCCGCCGGGAGCACGCAATTGGAGTAGGAATGGTGGCGCCAACACTCCAAGCGGCGACGAATCCGACGGGGATGATGACGAAGATGATGACGAGGATGACGATGACGACGATGATGTCGAAGGTGATGAAGGGCTTGTTGGTGTTGGTGATGGAAGCAAGCGCAATTCGAATCCAATTCTTGACATTAACGGTAGCAACGGTAGCAACGGTGGTGGCGGTGGTAGTTTGGGTGGTGTTACTGCTGCAGAGCGGATGGCAAATGGGAAAGGACAGCATCATTCGTCTTATGTTTCTACTAGAGAAATGTTGGGGAAGGATGGTGATATGGGGCAGCTGGTGCATAACAATGCGAGTGGTACTGATGAAGATCATCATCAGAGAGAGAGATTGGGTAAATCACAGAGTGCTGTAACCATTGCTGAAACTGATTGTGATGAGTACTATTCACATTATCTTCATGGCACGGAAGGATCGGGTTCTGTGCAGAAAGTTATGGTGGATGAGAATGGTTGTGGGTTTAGTGGAAGAAAGGACGTTCTGTTTTCAAGCGAGTCAGGGGAGTCGTTGAGGGCAATTCTTTCTGATCCTGTTACAGGTGCACTTATGGACGATGCCATGATATTACCTTGTGGGCATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTGCACCTGTTCTCAACCCACGTCCGAGGAATCAATATCTCAAAACCTATCACTTCGAGCTGCTGTGCAGGCATATCGGCGTGAAGAGGAGTCACAATTTTACCGGTCATCTAAAAGACGAAGAGAGAGATTTGATCAGGGTGGTTTTGGAGATTCAGCTGTTGTAGAACCACCAAGGGGGAGAGGTGTTCAATTTCCTTTTGCTGTGATGGACCGTGTTATCATAAAGGGAAACAAGAGGACACCGCAACGCTTTGTTGGGCGTGAAGCTATTGTAACAACACAATGCCTTAATGGATGGTATGTGGTGAAGACACTGGACAATGCAGAGAGTGTGAAATTACAGTATCGGTCCCTTGCTAAGGTTTTGGATGATTCTTCAAAACCTTCCTCCACCAAGATGCCACCTAATTGGCGTTAG 1365 0.4996 MSSEDIGLVPDQRIETGLSSSLVFQDETLRFSCGGPQRRVGDPGPKTRDLGGFIDDKMFSMERDRYFAAQSSEFRRSVYGDCSGRRDPPGARNWSRNGGANTPSGDESDGDDDEDDDEDDDDDDDVEGDEGLVGVGDGSKRNSNPILDINGSNGSNGGGGGSLGGVTAAERMANGKGQHHSSYVSTREMLGKDGDMGQLVHNNASGTDEDHHQRERLGKSQSAVTIAETDCDEYYSHYLHGTEGSGSVQKVMVDENGCGFSGRKDVLFSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPTSEESISQNLSLRAAVQAYRREEESQFYRSSKRRRERFDQGGFGDSAVVEPPRGRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDSSKPSSTKMPPNWR* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1451 454 MobiDBLite consensus disorder prediction 79 167 - -
Ahy10g1451 454 MobiDBLite consensus disorder prediction 32 53 - -
Ahy10g1451 454 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 51 453 - -
Ahy10g1451 454 MobiDBLite consensus disorder prediction 193 221 - -
Ahy10g1451 454 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 345 IPR013083 -
Ahy10g1451 454 MobiDBLite consensus disorder prediction 143 160 - -
Ahy10g1451 454 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62 51 453 - -
Ahy10g1451 454 SUPERFAMILY RING/U-box 274 346 - -
Ahy10g1451 454 ProSiteProfiles U-box domain profile. 275 347 IPR003613 GO:0004842|GO:0016567
Ahy10g1451 454 MobiDBLite consensus disorder prediction 106 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1451 Ahy-Chr10 80757174 80760762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1451 220 453 Plant U-box Gene Family AT5G05230 59.751 3.29e-87 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1451 - - adu:107470194 840.876