Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1349 ATGGGTGAATTTGGCGTTTCGCTCAAGGAAACTAAAAAAAATAGTGTTGCTGCTGCTACTAGTAATAGTAATGTTCTTGGGTTGGGTAGTGTGAGTAACAAGGTGCAGGTGCAGCAGCAGCAGCAGCATAATAATATTAATATTAATAATAATTATCTTGAAGCATTTCCTAGTAAGACGAGGATGATGATGATGATGATGATGGTGCATCATAATCATCACCACCATCCATTTGACAGTGATTCATCTGCTTCTGCTCTCGGTGATGATGGTGATGGTGATGGTCCCACGCTTCAGCACCATTTGTTAACTACTAATCATAATCATAGTATAAACAACGCTGCAGCTGCTAATAGTGGTGTTAATACCGTTGTTGTTGATGATGATGATGATGGTGCAGCAGCATCTGTAGAAGAAACAAGACAACCTTTGCAGCAGCCATTTCACTTTTCTCACTCTCCGTATTATTCTCCTTCTTCTGCTACTACAACTACAACCACAACCACAACCACTACTCGCTATCCCTTCAAATCGCCAGGAACAAGTGGTGGAATGATGGCGGCATCTTTAGGGAGGTTCCCTTTCACAAGTGCGCAATGGAGGGAACTTGAAAGACAAGCTATGATTTACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTGAGCTACTCCTTATGCCTATCGCTGCTGCTTCTCGCTCATCTCCTTTGGAAGGAGGAGGAGGTGGTGGTGGTTTCAATCTGAGGCTTTCAAGCAGTAACAATAATGATGCAGAACCAAATAGGTGCAGGAGAACAGATGGTAAGAAATGGAGATGTTCAAGAGAGGTTGCTCCTAATCACAAGTACTGTGAGCGTCATATGCATAGAGGCCGTACCCGTTCAAGAAAGCCTGTGGAACTTCACAACAACAACAACAATGGACACAATCTACTTAAGAGGGCTCGCCATGATTCTCATCCTTATGCTGCCTCTAGTGCTGCTGTTACTGTCGCATTCTCTAACCACTCTACAAGGAAAGATCCTTCTTCACCTCATTTTCTTGCTTCTGCTACCACCAATCATCATTCATACCTTGAATCTGCTTCTTCCCTTTCTCTTCACAACTTCGGTGCTGGTTCTGTTCCATCAAGTAGGGAGCCCAGGGGGTTGGATTGGATGCTGAATGGAGATCCTATTTCGCTTGGAACATCGGATTCAGAATGGAACACTCTGATGAACAACAACAAAGTTGGATTCAATGCTATGAGTTCCTGCAGTAACACTGAGCCTCAATATATGAACTCATTCCCAGTCTATAGCCCTGGATTGGATCAACAACACAACAAGCGCTCTCCAACTTTCCTTAACCCTGTTCTGGTTCCTATGGAAACTCTCCAATCTGATAAACCAAGGGTTTTCATCGATGCTTGGTCGAACGCGGCAACAGATCAAGAAACTAATGATGCCGATAACAAAAACTCTGTTTCATCAATTGAGAAATTGTCCCTCTCTTCTCTTGATTTATCAATGGGAGGTGGATATATGCATGAAGAAGTGGGGTTAGGCCTAATGGAAGAGCCAGAGCCAGAAGAGAACAACACAAGCAATGGCAATAAATCTGGCTTCTCAAATTGGCCCACACCACCACCTTGGGTAGCTTCAACCACCACACCTGGTGGTCCACTAGCTGAAGTTCTCATGCCAAGTACGGTCACTTCAACCAATGATGGTGCCGCCGCCACTTCCAATTCGAATCTGTCGTCTCCGGCCACGACAATGGTGTCATCTCCATCTGGGGTATTGCACAAGACACTTGCTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAAGGGTTCCATCTTCAGGGGCAAATTCTGAAATTGCCTTGCTCAGGTTCAATCAGAAGTAG 1893 0.4448 MGEFGVSLKETKKNSVAAATSNSNVLGLGSVSNKVQVQQQQQHNNININNNYLEAFPSKTRMMMMMMMVHHNHHHHPFDSDSSASALGDDGDGDGPTLQHHLLTTNHNHSINNAAAANSGVNTVVVDDDDDGAAASVEETRQPLQQPFHFSHSPYYSPSSATTTTTTTTTTTRYPFKSPGTSGGMMAASLGRFPFTSAQWRELERQAMIYKYMMASIPVPPELLLMPIAAASRSSPLEGGGGGGGFNLRLSSSNNNDAEPNRCRRTDGKKWRCSREVAPNHKYCERHMHRGRTRSRKPVELHNNNNNGHNLLKRARHDSHPYAASSAAVTVAFSNHSTRKDPSSPHFLASATTNHHSYLESASSLSLHNFGAGSVPSSREPRGLDWMLNGDPISLGTSDSEWNTLMNNNKVGFNAMSSCSNTEPQYMNSFPVYSPGLDQQHNKRSPTFLNPVLVPMETLQSDKPRVFIDAWSNAATDQETNDADNKNSVSSIEKLSLSSLDLSMGGGYMHEEVGLGLMEEPEPEENNTSNGNKSGFSNWPTPPPWVASTTTPGGPLAEVLMPSTVTSTNDGAAATSNSNLSSPATTMVSSPSGVLHKTLASLSDSSSNSSPRVPSSGANSEIALLRFNQK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1349 630 MobiDBLite consensus disorder prediction 567 630 - -
Ahy10g1349 630 Pfam WRC 258 300 IPR014977 -
Ahy10g1349 630 PANTHER - 158 619 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy10g1349 630 MobiDBLite consensus disorder prediction 520 555 - -
Ahy10g1349 630 MobiDBLite consensus disorder prediction 75 101 - -
Ahy10g1349 630 ProSiteProfiles QLQ domain profile. 194 229 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy10g1349 630 MobiDBLite consensus disorder prediction 148 180 - -
Ahy10g1349 630 PANTHER GROWTH-REGULATING FACTOR 7 158 619 - -
Ahy10g1349 630 MobiDBLite consensus disorder prediction 148 178 - -
Ahy10g1349 630 MobiDBLite consensus disorder prediction 523 544 - -
Ahy10g1349 630 Pfam QLQ 194 225 IPR014978 GO:0005524|GO:0005634|GO:0006355
Ahy10g1349 630 ProSiteProfiles WRC domain profile. 257 301 IPR014977 -
Ahy10g1349 630 SMART QLQ_2 193 230 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1349 Ahy-Chr10 73424818 73427704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1349 458 608 GRF Transcription Factor Family AT5G53660 36.943 5.69e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Ahy10g1349 WRC 7.60E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1349 - - adu:107469817 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1750 20 92642617 92645447 Ahy10g1349 10 73424818 73427704 hybridization