Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1345 ATGTGCGACGGAGCAGACCACGGTGTTGGATCGTTTGAGGGCGAAGGCTTTGCAGGGATGGAGTCAGACGAGTATGACTTTCAGGAAGATGAAACAAAACACGACAATCATGCAGAGGCTGATGTCGACAATGGGGATTCGGTTGAATTGGAAGACAATTTGGACGGCGTTGGAGGAATGTCTGACAATTATGCGGATGATGACTTGTATGCTTTTGATTCCGGCGAATCGATAGGTTGGATTGATTTTTTTATCTCGAGCGAGGAGGAGGTTCTCCGCTTTAATTTTTTAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTCCAGTGCGAGACGTTCCAGAAGCGAAAAACGTGGCAAAGTAAAGATACAGCAAGAGTTCGTGTGCCACCGACAAGGGTACCGATCCCCAAAGTTCTACTCAATGCCTAACCAGCAAAAGAAGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTTCGCATGGACGATGAATCAGGACGTTGGCACGTTGCCTACTTTTCAGACGCGCATAACCACCACGTTCTTGAGTTGTGA 588 0.483 MCDGADHGVGSFEGEGFAGMESDEYDFQEDETKHDNHAEADVDNGDSVELEDNLDGVGGMSDNYADDDLYAFDSGESIGWIDFFISSEEEVLRFNFLDVDIAFEFYQQYAKHHGSSARRSRSEKRGKVKIQQEFVCHRQGYRSPKFYSMPNQQKKPRAETRCGCPARMLLRMDDESGRWHVAYFSDAHNHHVLEL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1345 195 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Ahy10g1345 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 43 192 - -
Ahy10g1345 195 MobiDBLite consensus disorder prediction 1 57 - -
Ahy10g1345 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 43 192 - -
Ahy10g1345 195 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1345 Ahy-Chr10 73066926 73067513 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1345 FAR1 1.00E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1345 - - ahf:112770447 350.903