Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1338 ATGGGGTTTGTGATTGGAGGCGATAACCAGCAGAAGCATCAGCATCAGGACAACAATATGATGAGTTTTCACCTTCACATACCGCATCTCCATTTCAACCACCACGAGAAGAAGGAGGATCTGAAGGACATACCGAAGGGGTGCTTGGCGATCATGGTGGGCCAAGGAGAAGAGCAACAGAGGTTTGTTATTCCTGTTATATACTTCAACCACCCACTCTTCTTGCAGCTCCTCAAAGAAGCTGAAGACGAGTACGGTTTCGATCAGAAAGGACCTATCACCATACCCTGCCACGTCCAACACTTTCGCACCGTCCAGGATATCATTCATAGGGACAAATCTCACCACTTCCATCACCACCACCACCATAATCATCATCATGCCTGGTGCTTCAAAGTTTGA 402 0.4751 MGFVIGGDNQQKHQHQDNNMMSFHLHIPHLHFNHHEKKEDLKDIPKGCLAIMVGQGEEQQRFVIPVIYFNHPLFLQLLKEAEDEYGFDQKGPITIPCHVQHFRTVQDIIHRDKSHHFHHHHHHNHHHAWCFKV* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1338 133 Pfam Auxin responsive protein 38 106 IPR003676 GO:0009733
Ahy10g1338 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 22 126 IPR003676 GO:0009733
Ahy10g1338 133 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 22 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1338 Ahy-Chr10 72554884 72555867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1338 43 103 Calmodulin-binding Proteins AT5G20810 54.098 8.08e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1338 K14488 - gmx:100526867 199.904