Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy10g1330 | ATGGAACGTGACGGTGGCCATAAACAAACTTCTCACAAAACTCCGTACACTCAGCTTGAACAGGTTAGCTCTGATTTCTTTCTAGCAATTGGCCTGCAAGAGCAAAACGCAACAATATTCACAGCGCTCGCAGCGACACTGGAAAGCGAAGGATCCTCCTCGTCGCTTGATAATGAGCAGGAAGACGATGATAACGCTGATTTCTTCACGAGCTATGAGTTTGAAACGGAGGACCTTCAGTTTCTTGAAAGCGAAGGAAGCAACTACGGTGATGACGAAGACATGGATGACTTTGACTTCGACGTGGACGAATTGACATACGAAGAGTTAATTGAGTTGGAAGACTTTATAGGGAAGCAGAAGAGAGGGTTATCAGCAAATGAGGTTTCTTCGTGCTTGCATTCCTACACCTTCGATTCTGTTAACGAGAGGAAAAACAGTGGAACCGATCGGTGCGTGATTTGCCAGATTGAGTATGAAGAAGGTGAAGCGTTGGTGGCACTTCGTTGCGGACATCCTTTCCACACGGATTGCATAAGCAAGTGGCTTCAAGTAAGAAAGGTTTGCCCAATATGTAGCAGTGAAATTTCGGCTCCCGAGATTGTCAATAAACAAGAACCCTTCATTGTTTAG | 633 | 0.4518 | MERDGGHKQTSHKTPYTQLEQVSSDFFLAIGLQEQNATIFTALAATLESEGSSSSLDNEQEDDDNADFFTSYEFETEDLQFLESEGSNYGDDEDMDDFDFDVDELTYEELIELEDFIGKQKRGLSANEVSSCLHSYTFDSVNERKNSGTDRCVICQIEYEEGEALVALRCGHPFHTDCISKWLQVRKVCPICSSEISAPEIVNKQEPFIV* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy10g1330 | 210 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 114 | 199 | IPR013083 | - | |
Ahy10g1330 | 210 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 1 | 201 | IPR045191 | GO:0061630 | |
Ahy10g1330 | 210 | ProSiteProfiles | Zinc finger RING-type profile. | 152 | 193 | IPR001841 | - | |
Ahy10g1330 | 210 | SMART | ring_2 | 152 | 192 | IPR001841 | - | |
Ahy10g1330 | 210 | SUPERFAMILY | RING/U-box | 151 | 199 | - | - | |
Ahy10g1330 | 210 | PANTHER | E3 UBIQUITIN LIGASE BIG BROTHER-RELATED-LIKE | 1 | 201 | - | - | |
Ahy10g1330 | 210 | Pfam | Ring finger domain | 151 | 192 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy10g1330 | Ahy-Chr10 | 71286847 | 71287625 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy10g1330 | 99 | 196 | C3H Transcription Factor Family | AT3G63530 | 47.475 | 5.95e-28 | 104 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy10g1330 | K19045 | - | gmx:100777284 | 221.861 |