Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1304 ATGGAGACGGTTAATCAGGAACTTCTGATTGCTTTTTCTTTGAAAATGATGGCTACTCCAACTAAACCAATGGCCGTAATGTTGTCTGAATCTTTGGAACACAAGGGAAAGGATATCACTGAATTAAATGGTAACATACATCAATCCCCTATAAGTCAACAGCCCCATAGCTCCTCGGATGGTTCAGTAGCTATTCTTTGGGACATTGAAAACTGTCCTGTTCCGAGTGATGTCTGCCCTGAAGACGTAGCAGGAAATATAAGGATGGCGTTGCAAGTGCATCCAGTAATTCAAGGAACTGTTATGGTATTTTCTGCTTATGGTGACTTCAACGCTTTCCCTAAGCGACTTCGAGAGGGATGTCTAAGAACTGGTGTTAATCTCATCGATGTTCCTAATGGGAGAAAAGATGCTGCTGATAAAGCAATCTTGGTTGACATGTTTTTATTTGCTCTTGACAACCCTCCCCCATCATCTATTATGCTAATATCTGGAGACGTTGACTTTGCCCGAGCACTTCACATTCTTGGACAACGGGGATACACTATAATTCTTGTCATCCCTTCTGGGGTGGGTGTTTCATCTGCTTTATGCAATGCCGGAAAGTTTGTCTGGGATTGGCCTAGCGTTGCTCGTGGAGAAGGATTTGTTCCCCCGGCAAAGGCTTTAGTACCACCTCGTGGAGGTTCAGTTGAGGTTGCTGGATATTTGATGGGGTGCCATATTAATGACAACTTCGAGGGACAAAATGAGGAAGAAGCAATAGTTTATAGAGGGATGTCACAGAGATTATATAACTCAAGGGATTTCTCTATGGTTTCACAATCTCTATCTGAATACAATTGTACCACATCGAACATGGCTGGCTTACCGACAACTATGAGATCACACAGCCTTCCACCTGGGATGATTGATGTTTCAGGAATATCTATGCCTTCTAGTGACAATAATGAAGGCCAGCTTTGGGGCCCTATGTCTAGCGATTTAAATGTTCTCAAAGGCCAGTTGGTAAAGTTGCTTGAACTTTCTGGAGGGTGCCTGCCTCTGGCTCGAGTTCCAACAGAGTATCAGAAAGCTTATGGGAGAACTCTTTATGTATCTGATTATGGAGCAATTAAATTAGTCAATCTTTTCAAGAAGATGGGTGATACAATGGCAGTGGAAGGGAAAGGTCAGCGTAAATTTGTGTATCTCAGAAACTTCAAGGTAGGCCCGAGCGCTCCCCCATTGGCTCTAGCAAAGAAAGACAAGAAAGGAAAGGGGCTTCCAGAAGAGAATATGAATACTGTCACCGGTGGTGTCTCTTCAGATGAGTTCTCAGATGAAGAAAGACTAGTCATGGAAGAACCTGATGAGAGAAATTGTGTAGGAAAGGGCAGTCAAAGGAGAGCAGCTATCAATGACCGTGCTCTTGAGCAGTTCAAGTTCGAGCTTCAAGAGATTCTAGTCAGCTACTCGTGCCGAATATTCCTAGGTTGTTTTGAGGATATATACCAACAAAGGTACAAGAGACAATTGGAATATCAGAGACTTGGAGTGAACAAGTTGGAGGATTTGTTTGAGAAAGTCAATGATATTGTAGTATTGGTTGAGGAACCAGGAAGCAAGAGGAAGTTCCTTGCTCCAATGGGGGGTTAG 1638 0.4322 METVNQELLIAFSLKMMATPTKPMAVMLSESLEHKGKDITELNGNIHQSPISQQPHSSSDGSVAILWDIENCPVPSDVCPEDVAGNIRMALQVHPVIQGTVMVFSAYGDFNAFPKRLREGCLRTGVNLIDVPNGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVDFARALHILGQRGYTIILVIPSGVGVSSALCNAGKFVWDWPSVARGEGFVPPAKALVPPRGGSVEVAGYLMGCHINDNFEGQNEEEAIVYRGMSQRLYNSRDFSMVSQSLSEYNCTTSNMAGLPTTMRSHSLPPGMIDVSGISMPSSDNNEGQLWGPMSSDLNVLKGQLVKLLELSGGCLPLARVPTEYQKAYGRTLYVSDYGAIKLVNLFKKMGDTMAVEGKGQRKFVYLRNFKVGPSAPPLALAKKDKKGKGLPEENMNTVTGGVSSDEFSDEERLVMEEPDERNCVGKGSQRRAAINDRALEQFKFELQEILVSYSCRIFLGCFEDIYQQRYKRQLEYQRLGVNKLEDLFEKVNDIVVLVEEPGSKRKFLAPMGG* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1304 545 Gene3D - 466 538 IPR041966 -
Ahy10g1304 545 Gene3D - 326 397 IPR041966 -
Ahy10g1304 545 ProSiteProfiles OST-type HTH domain profile. 470 544 IPR025605 -
Ahy10g1304 545 MobiDBLite consensus disorder prediction 413 434 - -
Ahy10g1304 545 PANTHER LIMKAIN B LKAP 18 540 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy10g1304 545 CDD PIN_limkain_b1_N_like 63 188 - -
Ahy10g1304 545 CDD LOTUS 329 398 - -
Ahy10g1304 545 Pfam OST-HTH/LOTUS domain 330 395 IPR025605 -
Ahy10g1304 545 Pfam OST-HTH/LOTUS domain 471 535 IPR025605 -
Ahy10g1304 545 Pfam NYN domain 63 201 IPR021139 GO:0004540
Ahy10g1304 545 Gene3D - 56 208 - -
Ahy10g1304 545 ProSiteProfiles OST-type HTH domain profile. 328 400 IPR025605 -
Ahy10g1304 545 CDD LOTUS 471 534 - -
Ahy10g1304 545 PANTHER - 18 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1304 Ahy-Chr10 64043830 64046980 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1304 61 213 C2H2 Transcription Factor Family AT5G61190 43.137 2.69e-28 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1304 - - ahf:112715639 1070.84