Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1256 ATGGCGGCGCAGCCTCTCGAGCAGGTCCAATGCTTCGGTCGCAAGAAAACGGCGGTTGCGGTTACCTACTGCAAGCGCGGCCGCGGGCTCATCAAGATCAATGGCTGCCCAATCGAGGTTGTTGAGCCTGAGATCCTACGGTTCAAGGCCTTCGAGCCGATTCTTCTGTTAGGGCGGAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGTGGACACACTTCTCAGATCTACGCCATAAGGCAGAGCATAGCGAAGGCGCTGGTTGCGTTCTACCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATCAAGGACATTCTCGTCAGGTACGATAGGACCTTACTTGTTGCTGATCCAAGGCGCTGTGAGCCTAAGAAGTTCGGTGGTCGTGGCGCTCGCGCGAGGTTCCAGAAATCTTACCGTTAG 438 0.5685 MAAQPLEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEVVEPEILRFKAFEPILLLGRSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1256 145 ProSitePatterns Ribosomal protein S9 signature. 73 91 IPR020574 GO:0003735|GO:0005840|GO:0006412
Ahy10g1256 145 Gene3D - 1 145 IPR014721 -
Ahy10g1256 145 Pfam Ribosomal protein S9/S16 13 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ahy10g1256 145 PANTHER RIBOSOMAL PROTEIN S9 4 145 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ahy10g1256 145 PANTHER - 4 145 - -
Ahy10g1256 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 8 145 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1256 Ahy-Chr10 52902735 52903467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1256 1 145 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.986 1.42e-92 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1256 K02960 - mnt:21383843 281.567