Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1224 ATGCCACGTCACTCCCAAACCGTATATAAGCGCTTCACCCTCTCACTCCTCACTCTCAATTCCATCTTCAAACCGAAACGCGCCAAAGACCAGAACAGAACAGAGAAAGGAAAAACAGAGAGAACAAAAAAGATCGGAGACATGACTTCCCCTACGGACCGCCTCACAACGGAGCAGGAACTCACCGTCATCGTTGCCGCCCTCACCAACGTCGTCACCGGATCCACCTCCTTCTCCTCCTCCCCGGCGGATTTCATCCGCCACGCATCTCAGCCCTCTGCTGCCGTCGGCTCCAGCGGAAGCTGTGGCGGAGTATTCGAGGACACGTGTCGCGAATGCAACATCAAGGGATGTTTAGGGTGCAACTTCTTCCGCGAAGAGAAAAAAGTTAACAGCGGCAACAGCAAGAAAAGTAGCATTCAGAAAAGGGCGAAGAAGAAGTACAGGGGAGTGAGGCAGAGACCGTGGGGAAAATGGGCTGCGGAAATTCGCGACCCGCGGCGTGCGGCTCGCGTGTGGCTGGGGACATTCAACACGGCGGAGGAGGCCGCCATGGCTTACGACAAAGCCGCAATCGAGTTCCGTGGACCGCGAGCCAAACTCAATTTTCCCATGGTCGACGAGTCCCTTAGGGCCCAGGCCCAACAGCCCAACGTTAATGAGGCTATTGTGAAGGACGAGAATTCAAAGGAGGAGGAAATCGAAACGATGCCGTTTGGGAATAAAGAGAGCGAGTTCTGGGAAAGAATGGGAGATGCTGATTTTCAGCAGCTTATGATGATGATGGATTTTGCTGGAGATTCTTCTGATTCTGCGGCTACAGGGAACACCCTAAGTTCTTGA 843 0.535 MPRHSQTVYKRFTLSLLTLNSIFKPKRAKDQNRTEKGKTERTKKIGDMTSPTDRLTTEQELTVIVAALTNVVTGSTSFSSSPADFIRHASQPSAAVGSSGSCGGVFEDTCRECNIKGCLGCNFFREEKKVNSGNSKKSSIQKRAKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEEAAMAYDKAAIEFRGPRAKLNFPMVDESLRAQAQQPNVNEAIVKDENSKEEEIETMPFGNKESEFWERMGDADFQQLMMMMDFAGDSSDSAATGNTLSS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1224 280 CDD AP2 146 204 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Ahy10g1224 280 MobiDBLite consensus disorder prediction 27 51 - -
Ahy10g1224 280 ProSiteProfiles AP2/ERF domain profile. 147 204 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 51 273 - -
Ahy10g1224 280 Pfam AP2 domain 147 196 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 Gene3D AP2/ERF domain 146 206 IPR036955 GO:0003700|GO:0006355
Ahy10g1224 280 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 PRINTS Ethylene responsive element binding protein signature 170 186 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 SMART rav1_2 147 210 IPR001471 GO:0003700|GO:0006355
Ahy10g1224 280 MobiDBLite consensus disorder prediction 27 48 - -
Ahy10g1224 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 51 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1224 Ahy-Chr10 41057308 41058423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1224 41 207 AP2-EREBP Transcription Factor Family AT4G34410 45.455 1.42e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy10g1224 AP2 1.10E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1224 - - adu:107469741 532.332