Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1210 ATGGAGAAATATTTCAAAAGAACCTCATCATTGGAGATTGGATTCCAAAACAATTCATCGACTTCTTCTAATAAAAGGAGGTTTTTAGAATTTGAAGTAGATAATCTTATAGCAGATCCAGGACAACGACCAAAGATTTCAAGTTATCACCCGAATGACAGAGACAAAGTTAGATGTGCATATTTGCAAAAAGGTCCTTGTCAACCAAGGACTCACGATTTTCCGCAAACTGCTTGTGGTTCTTCTTTTCGAAGATTTAATCCTAATTGGTTTGATGACTATGGCAACTGGTTAGAGTATAGTATATCAAAAGATGCTGTTTTTTGTCTTTGTTGTTATCTTATGAAACCTGAGACTGAAGGTGGTGATGCTTTTGTAACTACTGGCTTTTCAAATTGGAAAAAAAAGGAGAGACTACAAATTCATGTTGGGATTCATGATAGCGCTCATAATCAAGCTTGGAGAAAATGTGAAGCACTTATGAGACCAAAACAACACATCACTGCTGCTATTGAAAAACAATCTGAGCAAGCTAAAAAGAATTATCAAATTCACTTGACAGCAACAATTGATTGTATTAGATTTCTTTTGCGACAAGGATTGGCCTTTCGTGGTAATGATGAGACAGATGATTCTGTTAACCAAGGAAATTTTTTGGAACTTCTAAACTTTCTTGCGCAACATAATGAAGAGATTGGTCGTGCTTTCAAAAATGCTCGTGGGAATCTTAAACTAATAGCACCCTCAATTCAAAAAGATATTGTAAGAGCTGCTGCAAGGGAAACGACAAAAGTTATTGTAGATGATCTTGGGGATGAATTATTTGCTGTATTGGTTGATGAAGCCCGTGACATTTCTATTAAGGAGCAAATGTCAGTTTGCTTAAGGTATGTGAATAAAGAAGGACAAGTTAGGGAGCATTTTCTTGGTCTTGTTCATGTTTCTAATACTAATGCTTTATCTCTAAAATTAGCATTGGAGTCATTATTAGAAACACATAATTTACGTTTATCAAGAGTACGTGGACAAGGATATGATGGTGCAAGTAACATGCAAGGAGAATTTAATGGTTTGAAAACTTTGATATTGAAAGAAAATTCTTATGCTTTCTATGTACATTGCTTTGCTCACCAACTTCAGTTAGCTCTTGTAACGGTTGCAAAAAAACAAGTTGAAATTGCTTTGCTTTTTAATTTGTTAACTAATTTGTGCAATGTTGTTGGAGCTTCGTGTAAACGAAGAGATATGCTTCGTGATAGTCAAATGACTAAGACAATTGAAGCACTAAAAAGTGGAGAAATTTCTAGTGGGCGTGGTTTGAATCAAGAAATAGCTTTAAAAAGAGCTGGAGACACTAGATGGGGTTCACACTATGGAACTATACTTAGATTAATTTCTTTATTTCCTTCTGTGGTTAATGTTCTTGAATATGTTGAGGAAGATGGAAATAATTCAGAACAAAGAGCTGAAGCATGTCATTTATTGAATGTCATTCAATCCTTTGAATTCATTTTCAACTTGCACTTGATGAAAAATATCTTGGGAGTTACTAATGAGTTATCTCAAGCGTTACAAAGGAATGATCAAGACATTGTAAATGCTATGGCATTAGTCAAAGTGTCTAAGCAACGGTTGCAAAATATAAGAGATGATGGCTGGTCTCTTTTACTTGACGAAGTCTCACTGTTTTGTGACAAACATGATATTACTGTTCCAATCATGGATGATATATTTGTGTCACAAGGAAGATCAAGACCTTGTTTGAATCCAAGACACTCATTTTTTGCATTTGATAAGGAGAAGTTGATCCAGTTAGCTCAATTCTATCCATTAGAATTTTCTTCCACTCAACTTTTGGCACTTGACAGTCAACTTGAGAACTTCATACTAGATGTGCGTTCTGATGATCAATTCTCAGACTTAAATGGAATTGGTGCTCTTTCTCAGAAGTTGGTTGAGACTCGAAAAAATATTGTTTATCCATTAGTATTTCTTCTTTTGAAGTTAGCTTTAGTTTTGCCCGTAGCAACTGCATCAGTTGAAAGAACTTTTTCTGCTATGAACATCATAAAGAGTCGACTTCGGAACCCCGATAATAGCGGAGCCCGCCAATTGATGTGTATTCAAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAATATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTATTATAA 2427 0.3548 MEKYFKRTSSLEIGFQNNSSTSSNKRRFLEFEVDNLIADPGQRPKISSYHPNDRDKVRCAYLQKGPCQPRTHDFPQTACGSSFRRFNPNWFDDYGNWLEYSISKDAVFCLCCYLMKPETEGGDAFVTTGFSNWKKKERLQIHVGIHDSAHNQAWRKCEALMRPKQHITAAIEKQSEQAKKNYQIHLTATIDCIRFLLRQGLAFRGNDETDDSVNQGNFLELLNFLAQHNEEIGRAFKNARGNLKLIAPSIQKDIVRAAARETTKVIVDDLGDELFAVLVDEARDISIKEQMSVCLRYVNKEGQVREHFLGLVHVSNTNALSLKLALESLLETHNLRLSRVRGQGYDGASNMQGEFNGLKTLILKENSYAFYVHCFAHQLQLALVTVAKKQVEIALLFNLLTNLCNVVGASCKRRDMLRDSQMTKTIEALKSGEISSGRGLNQEIALKRAGDTRWGSHYGTILRLISLFPSVVNVLEYVEEDGNNSEQRAEACHLLNVIQSFEFIFNLHLMKNILGVTNELSQALQRNDQDIVNAMALVKVSKQRLQNIRDDGWSLLLDEVSLFCDKHDITVPIMDDIFVSQGRSRPCLNPRHSFFAFDKEKLIQLAQFYPLEFSSTQLLALDSQLENFILDVRSDDQFSDLNGIGALSQKLVETRKNIVYPLVFLLLKLALVLPVATASVERTFSAMNIIKSRLRNPDNSGARQLMCIQIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVL* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1210 808 SMART Ribosomal_L14_2 687 808 IPR000218 GO:0003735|GO:0005840|GO:0006412
Ahy10g1210 808 SUPERFAMILY Ribosomal protein L14 689 808 IPR036853 GO:0003735|GO:0005840|GO:0006412
Ahy10g1210 808 Hamap 50S ribosomal protein L14 [rplN]. 687 808 IPR000218 GO:0003735|GO:0005840|GO:0006412
Ahy10g1210 808 Pfam Domain of unknown function (DUF4371) 123 357 IPR025398 -
Ahy10g1210 808 ProSitePatterns Ribosomal protein L14 signature. 746 772 IPR019972 -
Ahy10g1210 808 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN 124 712 - -
Ahy10g1210 808 SUPERFAMILY Ribonuclease H-like 272 696 IPR012337 -
Ahy10g1210 808 Pfam Ribosomal protein L14p/L23e 691 808 IPR000218 GO:0003735|GO:0005840|GO:0006412
Ahy10g1210 808 Gene3D Ribosomal protein L14 676 808 IPR036853 GO:0003735|GO:0005840|GO:0006412
Ahy10g1210 808 SMART 2118neu4 82 173 IPR006580 -
Ahy10g1210 808 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN-RELATED 124 712 - -
Ahy10g1210 808 TIGRFAM rplN_bact: ribosomal protein uL14 689 808 IPR005745 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1210 Ahy-Chr10 38902637 38923028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1210 698 808 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.783 1.06e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1210 - - ahf:112735508 1073.92