Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1152 ATGTCGTTGTCGAAGAGTGCAATGGATGTTGACTCGGAACCACTCAGTTCACAAGACAACGTCGAAGATCCCATGATGACTAGTATGGAAGAAAATGTTAACTGCACTTGTGATTGTGGTGGCAGCAGTAGTAAGTGTGTGACTGTGACGGCCGATGATATTATAAACCAGACTTTTGAAACATCAGATGCAGCTTATAACTTGTATGTACGTTATGCGAGGTGTCTCGGGTTTGGAGTTCGCAAGGGTGATACAGCACGTGAAAAAGATGGAACACAGCGTAGAAGGAGGTTTTTTTGCAGCAAGGAAGGAAAAAGAGCCGAGAAATACATATCTAGTTTGAGTAGGAAGCGGGAGCATAGAGCGCTGACTCGCACTGGTTGTGAAGCCATGCTTGCGGTGTATCTTGACACTAAAACTTCGACTTGGAGGGTTAAAAAATTAGTCGAGAAGCACAACCACGATCTTGTCCCACAATGCTTGGTACACCTAATTCCAAACCACCGAGGGTTGACTGAGCCACAAAAAGCTCAGGCGAATACCATGCATGATCATGGTCTTCCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGCCGGTGGTTATGCCAATGTCGGGTTCACAAAGAAGGACCTAGATAATCACTTTCAAAGAGCTCGTCGTGCAATGCTCATTGGTGGGGATTCCAATGCGACCATTAGCTATCTACTTGGGAAAACAGATGTCGACCCGATGGCCATGACAAGGTACAGTGCTACTGATGAAGGTCGGCTGGCAAATTTATTTTGGGCAGATGGCATTTGTAGGTCCGATTATCAGTGCTTTGGAGATGTGCTTGCATTCGATACAACCTACCGGAAGAATAAGTACAGAAGGCCCTTGGTAATCTTCTCAGGTTGTAACCATCACCGCCAAACATGTATATTTGGTTTTGCCTTGGTAGAGGACGAACGGACTGCAACATATACGTGGTTGTTGCAAAACTTTCTAGAAGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGACGGTGATGAAGCAATGAAGGCAGCAATTCGAGAAATCTTTCCGGATGCAACTCACCGATTATGTGGTTGGCACATTCAGAAGAATGTAACGGCAAACACAAAAAACAAAAATTTTTCCAACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGGAAGAATTTGAAGAATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTTCTAAGTGAATATGAGAAGAGGAAAAGTTGGGCAAGCGCTTACTTGAGGGATAAATTCTGTGCTGGATTTAGAACAACATCAAGGTGTGAGGCAATAAACAACTTCATTAAGAGGTTTATTGGCATTCGCCAAAGTCTTCTAGAGTTGGTCCAAAATCTTGAACATGCTCTTATGGACTATAGAAACAATGAATTAGTTTCTCAATTTAAGACGCTGTATGGGGAGCCCGTTCTAACTACTGGGCTAGAAGCGTTGGAGCTTTCTGCTGCCAATTTTTACACTAGGGAGATTCTTGGAGAAGTAAAAAAGGAGATTCAAGGAGTAGTTGCATTAGATGTAATAAATGAGGAAAACATATCAACCACTGTTGTGTTAAAAGTTAAGGAGTGTGACAGGAGACAACATACTTATATCGTACTTTACGATCGCAATACTAAGCATATGGAGTGTGAATGTAGTCGGTGGAGTAGTGAAGGCATTCCTTGCAGGCACATGTTTTGTGCAATGAAAAGGGTAGGTTTACAGAAGTTGCCAGATAGTCTTCTTTTGAGAAGATGGTCGAAGGATGCCAAGAAGTATCTGGATGAAAGTTCTGCTGGAGGCACTACGCAAGACAGAGAAAGAGAATTTTTAATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTCTGTCGTTGGACCCAAACACTAGAACAAAAATCTGACTTGAAAAGACAAACAACAGATTCTACCACGCCAAACTTTGTTGGTGACCCTTCGGTGGTCAAGACAAAAGGAGCACCCAAGGGGAAAAAGGAAAGGGGTAAACGGAGGTGCACTAAATGCAACAGTGCTGGTCATGTAAAGAATAAATGTCCTGTGAGGAATGACGGTGACGATTTGGGGGATAAGACTGGTAATGGCGCGCAAGCTAGCTTTGGTACCAAGGAGAAGCTTCCCAAGGACCCTATGGCTTCTCAAGAGACATTAGCAGTGCCAAATACAGAAGTAAATGTACCTGTGCAGCAAGAGTCTGGGCTAGGTGATTCAGGATTGATTAATGGCCATGAGAATCCCATCCCACCGTATGGAAGTCATCAGTGGCTATTACAGTCATCTGTGTACTTGAAGCAGCACGCTTTTGACCTCCTTGAGCTGCTCCTGTTGCAAGCATTTCCAGAACTAGATGATGTATTCAAGAAAGTGCATGAAGAAAAGCATAGATTTGGGGAATTCATATCACCAAAGTGA 2544 0.4336 MSLSKSAMDVDSEPLSSQDNVEDPMMTSMEENVNCTCDCGGSSSKCVTVTADDIINQTFETSDAAYNLYVRYARCLGFGVRKGDTAREKDGTQRRRRFFCSKEGKRAEKYISSLSRKREHRALTRTGCEAMLAVYLDTKTSTWRVKKLVEKHNHDLVPQCLVHLIPNHRGLTEPQKAQANTMHDHGLPTSKIMGLMVGQAGGYANVGFTKKDLDNHFQRARRAMLIGGDSNATISYLLGKTDVDPMAMTRYSATDEGRLANLFWADGICRSDYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALVEDERTATYTWLLQNFLEVMLNKSPSVVVTDGDEAMKAAIREIFPDATHRLCGWHIQKNVTANTKNKNFSNDFRRCLYAPWHPEEFEEYWENMIKKYGLEENEWVLSEYEKRKSWASAYLRDKFCAGFRTTSRCEAINNFIKRFIGIRQSLLELVQNLEHALMDYRNNELVSQFKTLYGEPVLTTGLEALELSAANFYTREILGEVKKEIQGVVALDVINEENISTTVVLKVKECDRRQHTYIVLYDRNTKHMECECSRWSSEGIPCRHMFCAMKRVGLQKLPDSLLLRRWSKDAKKYLDESSAGGTTQDREREFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVCRWTQTLEQKSDLKRQTTDSTTPNFVGDPSVVKTKGAPKGKKERGKRRCTKCNSAGHVKNKCPVRNDGDDLGDKTGNGAQASFGTKEKLPKDPMASQETLAVPNTEVNVPVQQESGLGDSGLINGHENPIPPYGSHQWLLQSSVYLKQHAFDLLELLLLQAFPELDDVFKKVHEEKHRFGEFISPK* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1152 847 MobiDBLite consensus disorder prediction 673 754 - -
Ahy10g1152 847 Pfam MULE transposase domain 279 373 IPR018289 -
Ahy10g1152 847 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 712 IPR031052 GO:0006355
Ahy10g1152 847 ProSiteProfiles Zinc finger CCHC-type profile. 708 724 IPR001878 GO:0003676|GO:0008270
Ahy10g1152 847 SUPERFAMILY Retrovirus zinc finger-like domains 699 728 IPR036875 GO:0003676|GO:0008270
Ahy10g1152 847 SMART 26again6 567 594 IPR006564 GO:0008270
Ahy10g1152 847 Coils Coil 462 482 - -
Ahy10g1152 847 PANTHER OS02G0262500 PROTEIN 53 712 - -
Ahy10g1152 847 ProSiteProfiles Zinc finger SWIM-type profile. 556 592 IPR007527 GO:0008270
Ahy10g1152 847 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
Ahy10g1152 847 MobiDBLite consensus disorder prediction 1 23 - -
Ahy10g1152 847 MobiDBLite consensus disorder prediction 700 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1152 Ahy-Chr10 30628931 30636581 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1152 MULE 8.10E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1152 - - ahf:112717474 1736.47