Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1121 ATGGTGGACCATTTCATTGTTTGCATTGATCGTATAATACCTTCCACCTCTTGTTTACCATCACCGCCGCACCATGATCATGTCCCTCCCTTCATTCAACTTGGTCCAGAACAAGAACAAGCCTGCTCCTCCTCCAATTCTTCCTCTTCAAATTACAAGCGTCACGATGATGATGATGATGTGGTTGTGGAGTGTAGAATATGTCAAGAGGAAGATCAAATCCATTCCATGGAGGCCCCTTGTTCCTGTAATGGCACTCTCAAGTTTGCTCATAGGAAGTGCATCCAAAAATGGTGCAACAAGAAAGGAAATACAATATGTGAAATCTGCAATCAGATATTTTCACCAAACTATTCTCTTCCAATAGTCAGAAGCAACGACATTATAGCAATTGATCTAAGGCAAGAATGGGAGCGTAATACAGATCTTCGTGTTGCTCTAACATCAGCGGAGAACCATTTAATGCAAAGAGAATATGAAGAATATGCTATCACACAAACCAGTAGCATCGCTTGCGTCCGCTGTGCCACTCTCATTTTGCTGATAGTCTTGCTTGTACGCCAAGCCTTAATGGTTACAACGAACTCTGCAACCAGGCGCGATTCATCAAGAATGTTTGATTTTGAGATGTCACTTCTTCAATTTGCCAGCATTCTTTTGCCGTGTTGCGCAATGGCACGTTCCTGGTATCTCATACAGAACAGAAGAAGACAGGGTTAA 720 0.425 MVDHFIVCIDRIIPSTSCLPSPPHHDHVPPFIQLGPEQEQACSSSNSSSSNYKRHDDDDDVVVECRICQEEDQIHSMEAPCSCNGTLKFAHRKCIQKWCNKKGNTICEICNQIFSPNYSLPIVRSNDIIAIDLRQEWERNTDLRVALTSAENHLMQREYEEYAITQTSSIACVRCATLILLIVLLVRQALMVTTNSATRRDSSRMFDFEMSLLQFASILLPCCAMARSWYLIQNRRRQG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1121 239 SUPERFAMILY RING/U-box 63 114 - -
Ahy10g1121 239 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 238 IPR033275 -
Ahy10g1121 239 Pfam Protein of unknown function (DUF3675) 116 229 IPR022143 -
Ahy10g1121 239 Pfam RING-variant domain 65 110 IPR011016 GO:0008270
Ahy10g1121 239 CDD RING_CH-C4HC3_MARCH 65 111 - -
Ahy10g1121 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 45 121 IPR013083 -
Ahy10g1121 239 ProSiteProfiles Zinc finger RING-CH-type profile. 57 117 IPR011016 GO:0008270
Ahy10g1121 239 SMART ringv_2 64 111 IPR011016 GO:0008270
Ahy10g1121 239 PANTHER OS01G0894600 PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1121 Ahy-Chr10 29332736 29335678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1121 57 160 C3H Transcription Factor Family AT2G37950 26.126 2.31e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1121 - - ahf:112786832 339.347