Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1114 ATGAATTTTGTATATTCCTATAATTTGGCTGGGAAGGGAAAACTTGTAGTTGTGGACTCCAATGATCAAACTAAGCTTAAACATGAGGATCAGAAGACTCTTCGTAGACTGGCTCAGAATTGTGAGGCTGCTAAGAAGAGTCGATTGAGGAAGAAGGCATATGTGCAGCAATTGGAGAATAGTAGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAGTCATCCAATTTCACGGTACATAGAAGGCCAAGAATGGGAGGCCATAGATTCATAGGAATGAGAACTCAACATCAAAAGCTGACTAGAAAATGTGATATTCGCGGCAACATTTTCTTGTGGGCATTTAAGGGAGTTATGGATCAGAACCCTTCCCCATTTGGGCACATTTTGCTTGATCAGAGTTTTAGCCCCAGCTGTATAATGCATCCAGATACTTACCTAAATAAGGTTCTCGTTGGGAGCGAGCAAGGTCCTATGCAGCTTTGGAACATTAGCACAAAGAAAAAGATATTTGAGTTTAAGGGATGGGATTCACCGATCACCTGTTGTGTTTCCTCCCCTGCTCTAGATGTCGTTGCAGTTGGGTGTGCAGATGGAAGCATTCATGTTCATAACATTCATTATGATAAAGAATTGGTTACATTTACACATTCTACACGAGGTTCTGTCACTGCCTTATCTTTCTGCACTGGCTTTTAG 699 0.4134 MNFVYSYNLAGKGKLVVVDSNDQTKLKHEDQKTLRRLAQNCEAAKKSRLRKKAYVQQLENSRVRLAQLEQELQSSNFTVHRRPRMGGHRFIGMRTQHQKLTRKCDIRGNIFLWAFKGVMDQNPSPFGHILLDQSFSPSCIMHPDTYLNKVLVGSEQGPMQLWNISTKKKIFEFKGWDSPITCCVSSPALDVVAVGCADGSIHVHNIHYDKELVTFTHSTRGSVTALSFCTGF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1114 232 SUPERFAMILY WD40 repeat-like 108 229 IPR036322 GO:0005515
Ahy10g1114 232 SMART brlzneu 28 106 IPR004827 GO:0003700|GO:0006355
Ahy10g1114 232 Gene3D - 30 81 - -
Ahy10g1114 232 SMART WD40_4 166 205 IPR001680 GO:0005515
Ahy10g1114 232 SUPERFAMILY Leucine zipper domain 32 76 IPR046347 GO:0003700|GO:0006355
Ahy10g1114 232 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 35 50 IPR004827 GO:0003700|GO:0006355
Ahy10g1114 232 Pfam bZIP transcription factor 31 72 IPR004827 GO:0003700|GO:0006355
Ahy10g1114 232 Gene3D - 108 230 IPR015943 GO:0005515
Ahy10g1114 232 PANTHER WD REPEAT-CONTAINING PROTEIN 36 104 231 - -
Ahy10g1114 232 Coils Coil 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1114 Ahy-Chr10 28659542 28661691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1114 12 73 bZIP Transcription Factor Family AT1G68640 69.355 2.58e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy10g1114 bZIP_1 2.30E-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1114 K14554 - adu:107469594 312.768