Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1111 ATGGGAAAGAAGGGTAGTTGGTTTTCTGCAATAAAGAGGGTTTTCACACACCACTCCAAGGAGAAGCAAGTACCTAATGATTCGGAGAACAAAAGCTCGAAAGATAAGAAGAAGAAAGGCCTAGGAAAACTAAGGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTTGGCGACTTTGAAAGAGAGCAACAATTACTATCTGTAAGGCCTCCAACGCCTCTCGAGCAACCAAAACCAGCCCCTGTTGTCCCTCCTAGAGCTGCTTCTCCAAGGGCTCCTTCTCCGAGGGCTCCATCTCCAAGAGCTGCGTCTCCGAAGGCTCCTTCTCCGCGTGCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGGTTGGCTATAGACCGGAACCAACTTTAAGGAACCAACATGCCGCAGCATCTAAGATCCAGGCTGTTTATAGAGGCTATATGGCCAGGAGGAGTTTTAGAGCTCTGAAGGGATTGGTGAGGCTTCAAGGCGTGGTAAGAGGACAGAATGTGAAGAGACAGACGGTTAATGCCATGAAACATATGCAGCTTTTGGTGCGAGTTCAGTCTCAAATTCAGTCTCGAAGGATTCAGATGCTGGAAAATCAGGCGCGATATCAAGCCGAGTTAAGGAATGACAAGGATGTTGCTAGCACCTTGGGCAAATTGACTTCTGAGAATGAAGAATGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGATTACAAAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATACTCTCATCAGTTATGGAAATCCACTCCGAAATCATCTTCGACGCCGGTGACAGACTTGCGATCCGGCCCTTGGTGGTGGAACTGGTTGGAGAGACAAATGCCAGCCTCATCAAATCCACAAGAGAAACAATCCCTCAAGAACTTCCAAATCACACCTCCAAGACCATACTCAGAACAGAAGACTAGTCCGAAACCCGCCTCGACCAGCACCCCCCGGCAGCATCATTTCGCCTTCGACAACATGGACATACCGACGCCAAAATCCACCAAATCAACCATACTCCCATCCTCAAAACCTTCTAGAACTCCACCATACAGAACTCCACAACCATCAACCATGTCAAAGTATTCAAGAGCCTTCGACGTGGCGCTGAAGGACGACGATAGCCTAACAAGTTGTCCACCATTTTCCGTGCCGAATTACATGGCTCCAACTGTTTCTGCCAAGGCCAAAGTTCGCGCCAATAGCAATCCAAGAGAAAGGTTTGGTGGTGTTGGAACTCCAACAAGTGATTCAAAGAGAAGACTCTCATTCCCTTTCACACAAGGGAACATGAGTGTGGATTCAACTGTTTCTTTGCCTGCTACCATGGGGAGAAAGCCTTTTACAAGATTTGTGTGA 1458 0.4733 MGKKGSWFSAIKRVFTHHSKEKQVPNDSENKSSKDKKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQLLSVRPPTPLEQPKPAPVVPPRAASPRAPSPRAPSPRAASPKAPSPRATSPKATSSRVVHHHKEVGYRPEPTLRNQHAAASKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAELRNDKDVASTLGKLTSENEEWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQLWKSTPKSSSTPVTDLRSGPWWWNWLERQMPASSNPQEKQSLKNFQITPPRPYSEQKTSPKPASTSTPRQHHFAFDNMDIPTPKSTKSTILPSSKPSRTPPYRTPQPSTMSKYSRAFDVALKDDDSLTSCPPFSVPNYMAPTVSAKAKVRANSNPRERFGGVGTPTSDSKRRLSFPFTQGNMSVDSTVSLPATMGRKPFTRFV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1111 485 ProSiteProfiles IQ motif profile. 150 178 IPR000048 GO:0005515
Ahy10g1111 485 MobiDBLite consensus disorder prediction 14 36 - -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 329 354 - -
Ahy10g1111 485 PANTHER IQ-DOMAIN 13 1 460 - -
Ahy10g1111 485 Gene3D - 148 201 - -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 79 135 - -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 1 56 - -
Ahy10g1111 485 SMART iq_5 149 171 IPR000048 GO:0005515
Ahy10g1111 485 MobiDBLite consensus disorder prediction 363 379 - -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 329 393 - -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 82 115 - -
Ahy10g1111 485 Pfam IQ calmodulin-binding motif 151 171 IPR000048 GO:0005515
Ahy10g1111 485 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Ahy10g1111 485 Pfam Protein of unknown function (DUF4005) 372 464 IPR025064 -
Ahy10g1111 485 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1111 Ahy-Chr10 28489045 28493776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1111 1 484 IQD Protein Family AT3G59690 49.458 2.90e-147 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1111 - - lang:109331805 660.603