Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1077 ATGTCGGACGCTTTGATCAATGGATTGGCCGGAGCTGGGGGAGGGATCATTTCTCAGCTCATAACATACCCTCTTCTAACTTTAAACACTCGCCAACAAACCGACCGTGATGTAAAGAAAATCAAGAGTAAAGTTGGAACCCTCGACCAAATGTGCCAGGTTGTGAAGGAAGAAGGGTGGGAACGATTGTATGGAGGGTTGATACCATCACTAGTTGGTACTGCTGCATCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAGAGCCGAAGAAGCTGCACTAACACAAAAAAAGATTGGCATCAGTGATGGATCAGTTGGAATGCTATCCTCTCTTTTTATTGCTGCTTTATCTGGGTCTCTTAATGTGCTTTTGACGAATCCTATATGGGTTGTTGTCACCCGTATGCAGACACAAAGAAAAGAGTCAAATAAGAAAGATCCTGACATGGGATTGTTAATTGTTGGTGGTGAAGAAAGCGTTCCTCTTCCTGCAGATAAGCCTCTTCCATATGACACTAAACATGTGATACAAGTCTATGAAGAAGGTGGAATCCTTGGTTTCTGGAATGGTGTGTTACCATCATTGATCATGGTATGCAACCCTTCCATTCAGTTCATGCTGTATGAAACCATGTTATTAAAGATGAAAAGAAGACCTTATGGGAATAAGAAGGGTAGAAATGGGGTAACTGCATTTGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTAGTTCTCAAGTCAAGGCTTCAAGCTAAACAGGATAAAACAGGGGACAACAGGCACCATTATACAGGCACATGGGATGCAATTGTTAAGATGATAAACTATGAAGGGATCTATGGATTCTACAAAGGCATGGGCACTAAAATTGTACAAAGTGTTCTAGCTGCTGCTGTTTTGTTCATGATGAAGGAAGAACTCGTTAAGGGCGTTCAATCCTTTCTAGCTAAAGATGGATCTAACGCTGTAAAGCGAAAACAATGA 1026 0.4103 MSDALINGLAGAGGGIISQLITYPLLTLNTRQQTDRDVKKIKSKVGTLDQMCQVVKEEGWERLYGGLIPSLVGTAASQGVYYYFYQIFRNRAEEAALTQKKIGISDGSVGMLSSLFIAALSGSLNVLLTNPIWVVVTRMQTQRKESNKKDPDMGLLIVGGEESVPLPADKPLPYDTKHVIQVYEEGGILGFWNGVLPSLIMVCNPSIQFMLYETMLLKMKRRPYGNKKGRNGVTAFEIFLLGALAKLGATVVTYPLLVLKSRLQAKQDKTGDNRHHYTGTWDAIVKMINYEGIYGFYKGMGTKIVQSVLAAAVLFMMKEELVKGVQSFLAKDGSNAVKRKQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1077 341 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 340 IPR044712 GO:0006862|GO:0055085
Ahy10g1077 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Ahy10g1077 341 PANTHER PEROXISOMAL NICOTINAMIDE ADENINE DINUCLEOTIDE CARRIER 1 340 - -
Ahy10g1077 341 Gene3D Mitochondrial carrier domain 97 326 IPR023395 -
Ahy10g1077 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 324 IPR018108 -
Ahy10g1077 341 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 218 IPR018108 -
Ahy10g1077 341 SUPERFAMILY Mitochondrial carrier 3 320 IPR023395 -
Ahy10g1077 341 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Ahy10g1077 341 Pfam Mitochondrial carrier protein 109 216 IPR018108 -
Ahy10g1077 341 Pfam Mitochondrial carrier protein 234 323 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1077 Ahy-Chr10 26796453 26801540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1077 53 341 Chloroplast and Mitochondria Gene Families AT1G25380 24.913 2.26e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1077 K13354 - gmx:100775784 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1467 20 41087044 41092102 Ahy10g1077 10 26796453 26801540 hybridization