Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1075 ATGCCTTCTTCGTCTGCACCAATTACTATAATCTCAAGATGCACCGTTGTCCCTCACAAACCCTCAACACTCAACGACCTCAAGCTTTCAATCTCAGACCTCAACATGCTCTCTTGTCACTACATCCAAAAGGGATGTATCTACGCTGCACCCTCACTCCCTCAAACCACTCTAATCCAATCCCTTAAAACCTCACTCTCACAAACCCTCTCCATCTTCCCTCCCCTCGCCGGAACCTTCCGAACCTCAGATTCCGGACATGTCTACGTCCATTCTAATGACTCCGGCGTCCATTTCATCCACGCCGCGGCTTCTGCAGTTTCTGTCTCCGACCTCTTGTCCTCAAAGGACGTCCCCAACACCTTCCAACAACTCTTCCCCTTCCACAAGAAACTAAACTACACCGCTCATTTCTCTCCGATCATGGCCGTTCAGGTCACCGAGCTCGCCGATGGTGTCTTCATCGGCGTCGCCGTCAACCATGCCGTCACCGACGGAGCCTCCCTCTGGCACTTCTTCAACACCTTCGCTGAATTCTCCAGAGGAGCCGCATCGCCATCGAGGCTCCCGGACTTCCGCCGGGACTCAATTCTGGTCTCCGAAGCCGTCCTCCGGCTACCGGACGGCGACCTTAAGGTCTCCTTCAATGCCAACGAGACCTTGCGCGAGAGGATCTTCGGCTTCAGCCGTGAATCCATTCGGAGGCTGAAAGCAGAAGCAAACCGCCGCGCACCGCCGGAGAATCAAATCTGCAGCGATGACGGCGGCTCCGCCGTTGAGTTGATGGCGAAGATGAGCAACGACACGAAATTGGAAACGGTTACTGGAAACAAACCAAATAGTGAAATCGTTGAGATCTCGTCCTTTCAGTCCCTCTGCGCGCTGACTTGGCGTGCGGTTACGCGTGCTAGGAAGATTCCGTTATCCAAATCGACGACATTTAGAATGGCGGTTAACGTTCGCAGCAGAATGGAGCCGAAGCTTGGGGATAACTACTTTGGGAACGCGATTCAGAGCTTTGCCACGTGTGCGACCGCGGAAGAAGTAGTGTGCAGGGACCTTTCGTGGAGCGCAAAGCAGCTGAACAAGAGCGTGAGGGCGTACGATAGCGATGCGGTGAAGCGCGCCATAGAGGATTGGGAGTGCGAGCCACAGTGCTTCGCTTTGGGGAACCACGACGGCGCCACGGTGCAGATGGGGAGCTCTCCGCGGTTTCCTATGTACGATAATGATTTCGGGTGGGGGAAACCAGTGGCTGTGAGGAGCGGCGCCGCCAATAAGTTCGACGGAAAGATGTCGGCATTTCCTGGGAGGGATGGCGGCGGTTCCGTGGACTTGGAGGTGGTCTTGGCGCCCGATGCTATGGCGGCTCTTGAGTGTGACGACGAGTTCATGCTCTATGCATCTGGTTGA 1413 0.5527 MPSSSAPITIISRCTVVPHKPSTLNDLKLSISDLNMLSCHYIQKGCIYAAPSLPQTTLIQSLKTSLSQTLSIFPPLAGTFRTSDSGHVYVHSNDSGVHFIHAAASAVSVSDLLSSKDVPNTFQQLFPFHKKLNYTAHFSPIMAVQVTELADGVFIGVAVNHAVTDGASLWHFFNTFAEFSRGAASPSRLPDFRRDSILVSEAVLRLPDGDLKVSFNANETLRERIFGFSRESIRRLKAEANRRAPPENQICSDDGGSAVELMAKMSNDTKLETVTGNKPNSEIVEISSFQSLCALTWRAVTRARKIPLSKSTTFRMAVNVRSRMEPKLGDNYFGNAIQSFATCATAEEVVCRDLSWSAKQLNKSVRAYDSDAVKRAIEDWECEPQCFALGNHDGATVQMGSSPRFPMYDNDFGWGKPVAVRSGAANKFDGKMSAFPGRDGGGSVDLEVVLAPDAMAALECDDEFMLYASG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1075 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 468 - -
Ahy10g1075 470 SUPERFAMILY CoA-dependent acyltransferases 47 187 - -
Ahy10g1075 470 Pfam Transferase family 7 465 - -
Ahy10g1075 470 Gene3D - 212 460 IPR023213 -
Ahy10g1075 470 Gene3D - 8 205 IPR023213 -
Ahy10g1075 470 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1075 Ahy-Chr10 26330004 26331934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1075 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.781 2.02e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1075 - - gmx:100792476 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1464 20 40660665 40662579 Ahy10g1075 10 26330004 26331934 hybridization
Ahy10g1075 10 26330004 26331934 Ahy17g0980 17 12218447 12220256 PCT
Ahy10g1075 10 26330004 26331934 Ahy7g0808 7 10214634 10216449 PCT