Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1069 ATGGAGGGAAAGGAACAAGATGTGTCATTGGGAGCTAACAAGTTCCCAGAGAGACAGCCGATCGGGACGGCGGCGCAGAGCCAAGACGATGGGAAGGACTACAAGGAGCCACCACCAGCTCCGCTATTTGAGCCTTCAGAACTGACCTCGTGGTCGTTCTACAGGGCCGGAATAGCGGAGTTCGTGGCCACTTTCCTCTTTCTATATATCACAATCTTGACGGTTATGGGAGTGAATAGGTCTTCTTCCAAGTGCGCCACTGTTGGTATTCAAGGAATTGCTTGGTCCTTTGGTGGCATGATCTTTGCCCTTGTTTACTGCACCGCTGGCATTTCTGGTGGTCATATTAACCCGGCAGTGACATTTGGTTTGTTCTTGGCGAGGAAGTTGTCTTTGACGAGGGCAGTATTCTATATGGTAATGCAGTGCCTTGGAGCAATTTGCGGTGCTGGAGTTGTTAAGGGCTTCGAGGGCAAAACCTTCTACGGCAGCCACAATGGCGGTGCCAACTTCGTCGCCCCTGGTTACACCAAAGGCGACGGTCTTGGCGCTGAGATTGTTGGTACCTTTATTCTTGTCTACACCGTCTTCTCTGCCACCGATGCCAAGCGCAACGCACGAGATTCTCACGTTCCACTTTTGGCACCATTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATTCCCATCACCGGAACCGGTATCAACCCTGCTCGGAGTCTTGGTGCTGCGATCATCTTCAACAAAGACCTCGGTTGGAATGACCATTGGATTTTCTGGGTGGGTCCTTTCATTGGAGCAGCTCTTGCGGCTCTCTATCACCAAGTTGTGATCAGGGCCATGCCTTTCAAATCTAGCTAA 870 0.5115 MEGKEQDVSLGANKFPERQPIGTAAQSQDDGKDYKEPPPAPLFEPSELTSWSFYRAGIAEFVATFLFLYITILTVMGVNRSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGKTFYGSHNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPLLAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDLGWNDHWIFWVGPFIGAALAALYHQVVIRAMPFKSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1069 289 Gene3D Glycerol uptake facilitator protein. 40 288 IPR023271 -
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 TIGRFAM MIP: MIP family channel proteins 59 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 CDD MIP 55 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 1 288 - -
Ahy10g1069 289 SUPERFAMILY Aquaporin-like 47 282 IPR023271 -
Ahy10g1069 289 Pfam Major intrinsic protein 47 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g1069 289 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Ahy10g1069 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 288 IPR034294 -
Ahy10g1069 289 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1069 Ahy-Chr10 26028347 26031804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1069 1 289 Major Intrinsic Protein MIP AT4G23400 84.429 1.29e-172 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1069 K09872 - gmx:100791447 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1457 20 38844329 38847291 Ahy10g1069 10 26028347 26031804 hybridization
Ahy10g1069 10 26028347 26031804 Ahy17g0976 17 12177020 12179629 PCT
Ahy10g1069 10 26028347 26031804 Ahy7g0803 7 10163197 10165061 PCT
Ahy17g0976 17 12177020 12179629 Ahy10g1069 10 26028347 26031804 PCT
Ahy7g0803 7 10163197 10165061 Ahy10g1069 10 26028347 26031804 PCT