Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1036 ATGAAGTCATCAATCCACTACCTCCAACATCCTCCTCCGCAGCCGCCGCCGCCACCACTCTCCGACTCCGACACCGACTCCGACGGAAGCGGAACCCACTCCTCCTCCTCCGATCTTCTCCGCCATTCCGACCTCTCCGCCTCCATCTTCAAACCCTACTTCGAGTTCACCGGCCGCCACTCCTCCTCCTCCACCACCGCCACCCCCGCCGAAGTGTCAAAGATCCAATCCTTCCTTACTTCCTCATCCTCCGGCGCACTCTCATGCCTCATCTGCCTCGAACGCATCAAACCCTCAGACCCAACATGGTCCTGCTCCTCGCTCTGCTTCGCCCTCTTCCACCTCCATTGTATCCAATCATGGGCCCGCCAAGCCTCCAATCTCGCTGCCGCACGCGCCGCCACGCGCCTCCCTATCACAGAGCAGCGCGCCTCTGAAACCGCGCTCTGGAACTGCCCCAAATGCAGGGTAGAGTACCCAATCACGCACATTCCAAAAACCTACTTTTGCTTCTGCGGAAAACTCGAGAACCCTCCCAATGATCCATGGGTTTTGCCTCATTCTTGCGGTGAGATTTGTGGGAGGCCATTGAAGCACAACTGTGGTCACCATTGCCTTCTTTTATGCCACCCTGGACCCTGCCCGTCCTGCCCAAAACTCGTGAAAGTTAGTTGCTTTTGTACCAAAATTGAAGATGTGAGGAGGTGCGGGTTCAAGGAGTTCTCGTGTGGGAAAGTTTGTGGGAAGCTTCTGGATTGTGGGGTTCATGGTTGTGCTGAGATTTGTCATGAGGGTCAATGCCCTCCCTGCCGGGCACGCAGTGTGTACCAGTGCCGGTGTGGTAAGAAGAAGGAAGAGAGGGAGTGCTGTAACCGTGTTTTCGGGTGTGGCGAGCCTTGTGAGAAGAGGCTCGGATGTGGGAGGCATGTGTGTGAGAGAGGTTGCCATGTTGGGGAGTGTGGAGACTGCCCTTTGCAAGGGAAGAGGGCATGTCCTTGTGGGAAGAGAGTGTATGAAGGGATGCCTTGTGATGTTACTGTGCCCTTATGTGGGGCTACTTGTGATAAGATGCTTAGTTGTAGGTACCATAGGTGCCCCGAGAGGTGCCACCGTGGTGCATGTGTTGAGACTTGTAGGACTGTTGTGAAGAAGTCTTGTCGATGCGGCAGCCTCAGGAAAGATGTTCCTTGCTATCAAGATTTGTGGTGTGAAAGGAAGTGCCAGAGGATGCGGGACTGTGGCCGGCATGCTTGTAAACGCAAGTGCTGTGATGGGGATTGCCCTCCATGCTCAGAGGTCTGTGACAGGCGGCTTAGATGTAAAAACCATAAATGCCCTTCTCCATGCCATAGGGGTGCCTGTGCTCCTTGCCCAATAATGGTCACCATTTCATGTGCATGTGGGGAAACACATTTTGAGGTTCCTTGCGGTACTGAAATGGAACAAAAACCACCCAAGTGTCCTAAACCATGCCCTATTGCTCCTTTATGCCATCATGCACCAAAGCTCAAGCCACACAAATGCCATTATGGAGCCTGTCCTCCTTGTCGGCTCCCTTGTGCAGAAGAGTACTCTTGTGGCCATGCTTGCAAATTAAGGTGTCATGATGCTAAACCTCCGCCTAATCGGGAGTTCACTCTCAAACCAAAGAAAAAGAAAATTATACAACAAAGTGAATGTACACCTGGTACTCCATGCCCTCCTTGCCCTGAACTAGTGTGGAGACCATGTGTCGGGCAACACATTGGAACGGAGCGAATGATGGTCTGCTCTGATAAATCACAGTTTGCCTGTGAAAACTTATGTGGAAATCCTCTACCGTGCGGTAATCATTATTGTACTAAAACCTGCCATGCCTTGGAGAATCCGGCCTCCACGAACCGGCTACAGAAAAGTGAGCCTTGTGAAGATTGTTCTCTTCCTTGTGATAAGGAAAGAGAACCTAAATGTCAGCATTGTTGCCCTCGTCAATGCCATCCTGGAGACTGTCCTCCATGCAAAGCGCTGATCAAGCGGTCTTGTCATTGTGGCTCAATGGTCCATGTGTTTGAGTGCATATATTACAACACCTTGTCAGCTAAGGATCAAGAGAAAGTCCGTTCATGTGGTGGGCTGTGTCATAGGAAGTTAGCAAATTGTACCCATCTATGCCCCGAGACGTGCCATCCTGGTGAATGCCCAAATCCTGAGAAATGCAGTAAAAAGGTCATCGTTCGTTGCAAATGCCAAACACTGAAAAGGGAGTGGCCATGTCACGATGTTCAAGCAGCATATCACAGTGCTGGTTCCCACCCAAAGGATATTACCAAAAATCAATTTGGAATTGGCCTTATTCCTTGCAATTCTGATTGCAAGAGTAAAATGCAGGTTGTTGAGTCGGAATTACATCTACGTAAATCTCAAGTTACAGAGGTAAAAGAGACAGATAATGAAAAACTGGCTCCGAAGCGACGAAAAAGGCAGAAACGAGTCCAAGAATCTAAGGAAGCAACAAAAATACAGAAAATTATTTCTACAACAAAGAAGCTCCTTCTGTACCTTTTTATTTTGATCGTACTTGTTACTGCTACATATTATGGATACAAGGGACTTCTGTGGCTCAATGATTGGATGAATGAAGTTGATGAACGAAGACAAAGACATCCTAGGATCAGATGA 2658 0.4966 MKSSIHYLQHPPPQPPPPPLSDSDTDSDGSGTHSSSSDLLRHSDLSASIFKPYFEFTGRHSSSSTTATPAEVSKIQSFLTSSSSGALSCLICLERIKPSDPTWSCSSLCFALFHLHCIQSWARQASNLAAARAATRLPITEQRASETALWNCPKCRVEYPITHIPKTYFCFCGKLENPPNDPWVLPHSCGEICGRPLKHNCGHHCLLLCHPGPCPSCPKLVKVSCFCTKIEDVRRCGFKEFSCGKVCGKLLDCGVHGCAEICHEGQCPPCRARSVYQCRCGKKKEERECCNRVFGCGEPCEKRLGCGRHVCERGCHVGECGDCPLQGKRACPCGKRVYEGMPCDVTVPLCGATCDKMLSCRYHRCPERCHRGACVETCRTVVKKSCRCGSLRKDVPCYQDLWCERKCQRMRDCGRHACKRKCCDGDCPPCSEVCDRRLRCKNHKCPSPCHRGACAPCPIMVTISCACGETHFEVPCGTEMEQKPPKCPKPCPIAPLCHHAPKLKPHKCHYGACPPCRLPCAEEYSCGHACKLRCHDAKPPPNREFTLKPKKKKIIQQSECTPGTPCPPCPELVWRPCVGQHIGTERMMVCSDKSQFACENLCGNPLPCGNHYCTKTCHALENPASTNRLQKSEPCEDCSLPCDKEREPKCQHCCPRQCHPGDCPPCKALIKRSCHCGSMVHVFECIYYNTLSAKDQEKVRSCGGLCHRKLANCTHLCPETCHPGECPNPEKCSKKVIVRCKCQTLKREWPCHDVQAAYHSAGSHPKDITKNQFGIGLIPCNSDCKSKMQVVESELHLRKSQVTEVKETDNEKLAPKRRKRQKRVQESKEATKIQKIISTTKKLLLYLFILIVLVTATYYGYKGLLWLNDWMNEVDERRQRHPRIR* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1036 885 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 15 880 - -
Ahy10g1036 885 MobiDBLite consensus disorder prediction 23 39 - -
Ahy10g1036 885 MobiDBLite consensus disorder prediction 806 826 - -
Ahy10g1036 885 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 15 880 IPR034078 GO:0003700
Ahy10g1036 885 CDD NF-X1-zinc-finger 403 451 - -
Ahy10g1036 885 CDD NF-X1-zinc-finger 430 478 - -
Ahy10g1036 885 Pfam NF-X1 type zinc finger 526 536 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 413 431 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 306 324 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 651 667 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 507 517 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 201 218 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 608 618 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 714 732 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 253 271 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 362 379 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 Pfam NF-X1 type zinc finger 440 458 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 440 459 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 253 272 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 360 380 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 413 432 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 306 325 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 713 734 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 608 640 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 526 571 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 650 668 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 201 219 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 SMART znfxneu3 497 518 IPR000967 GO:0005634|GO:0008270
Ahy10g1036 885 CDD NF-X1-zinc-finger 189 237 - -
Ahy10g1036 885 CDD NF-X1-zinc-finger 350 399 - -
Ahy10g1036 885 SUPERFAMILY RING/U-box 87 162 - -
Ahy10g1036 885 CDD NF-X1-zinc-finger 243 289 - -
Ahy10g1036 885 CDD NF-X1-zinc-finger 296 343 - -
Ahy10g1036 885 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1036 Ahy-Chr10 23644111 23651921 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Ahy10g1036 zf-NF-X1 1.80E+02 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1036 K15683 - gmx:100799540 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1406 20 34058867 34066801 Ahy10g1036 10 23644111 23651921 hybridization