Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1002 ATGGCTGGTACTCGGTGTGCAGACGATATCAAGTTCAATGGTTCTACTTCTACCGAAGTTATGGGTCATGAATTTTCTAATGAAGGGGTTAATAGTGAGCATACATCATATGATCAGTATGTGCAAGAGGAAGAAAAACATGAGGAAGTTGACGTAGATTATATGAATGAGGATGACACAAATGTGAAATCAATGTTCGATTATCACGGCTTCGATGAATGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGAAAGAAGATGTATGTCATTTTCACTTTTCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGAAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTATATGTCATCGTGAAGGATTTAGACCGCAAAATAATTACGGCATTGGAAACTTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATAGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTTTGATGAACACAATCATCCATTTTTGGATCCTCGGTTGACTGGATTGCTCCCTGGCATAGATTCATGTCCGAGGCTGAAGTATCTAGAAGATCAAACAAAATACCTGGTGATGCATATGCAGTGGTGCACGAAATTGTGA 711 0.3952 MAGTRCADDIKFNGSTSTEVMGHEFSNEGVNSEHTSYDQYVQEEEKHEEVDVDYMNEDDTNVKSMFDYHGFDEWYNIDSLEDIGMIEFWNIRKEDVCHFHFSDVNIAFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFICHREGFRPQNNYGIGNFKRKPTPETRCGCSAMIEIRVDAPSGRWFISYFFDEHNHPFLDPRLTGLLPGIDSCPRLKYLEDQTKYLVMHMQWCTKL* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1002 236 Pfam FAR1 DNA-binding domain 109 198 IPR004330 -
Ahy10g1002 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 38 210 - -
Ahy10g1002 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 38 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1002 Ahy-Chr10 20374356 20375165 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy10g1002 FAR1 6.00E-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1002 - - aip:110265874 374.785