Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0982 ATGAAGGGATATGAGCCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAATTACTCAAGAGAAGATGCATCCCCAACTGCATCTTCGCGCCGTATTTTCGCTCCGATGAGTGCAAGAAATTCGCGAAAGTTCACAAGGTGTTCGGAGCAAGCAATGTGAGCAAGATCCTCATTGAGGTCCCTGAAGAGCAAAGAGAGGACACGGTGAATTCTCTCGCTTATGAGGCCGAAGCCAGGCTCCGCGACCCAGTTTATGGATGCATTGGCGCCATAGCGCTCCTTCAGAGGAAGATGGTAGAGTTACAACACGATCTGGCGATAGCTAAAGATCGCCTGGCTCGTGTTGTAGCTTCTACTACATCTGCCTCTGAGTCTGCTTTGGTCGCTACTACTACTTTTAGTAGTAGCGATGAAATTATGCATGGTTCTTCTTATTCCCATGTTAGCTTGCCCCCTTTTCCTTGCAGTGATTTCAGTGATAGCTTCTGCCATAGCTCTTCTTCTTCATCTCAATTCTTGAGCCGACATGATCAAGCGGTTGATGATTTCACTCAAATCCCATACATATTTTAA 570 0.4649 MKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARVVASTTSASESALVATTTFSSSDEIMHGSSYSHVSLPPFPCSDFSDSFCHSSSSSSQFLSRHDQAVDDFTQIPYIF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0982 189 Coils Coil 90 110 - -
Ahy10g0982 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 162 - -
Ahy10g0982 189 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Ahy10g0982 189 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Ahy10g0982 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0982 Ahy-Chr10 19247279 19248209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0982 1 111 AS2 family AT3G11090 81.081 1.61e-64 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy10g0982 LOB 1.60E-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0982 - - gmx:100305534 252.677