Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0980 ATGGAAGAAGAGGGGGAAGGGAAGGGGAAGGGAATCCACCGCCGCTATTCCTCGCCGCCGCCGCTGCTCCTCGCCGCCGCCGCTGCTCCTCACCTCCGCCGTCGCTGTTCCTCACTGCCGTCACTGCTCTCCGTCGTTCGGTCGCTGGATCTCGCTGCTGCTCCTCGTCACTCGGTCCTCGCTGCTGCTCCTCGACTCCACTTGGCAATCATTCCTATCACTGAAACTGGGACTAACCCAGCTAGGAGCTTTGGTGTTGCCATCATCTTCAATAGAGACCATGCATGGAATGATCAGTGGATTTTCTGGGTTGAGCTTTTCATTAGAGCTACTCTTGCTACCGTGTACCACCAGATAGTCATCCAATTTTACTTCTGTTTATGCTTCTGA 390 0.5513 MEEEGEGKGKGIHRRYSSPPPLLLAAAAAPHLRRRCSSLPSLLSVVRSLDLAAAPRHSVLAAAPRLHLAIIPITETGTNPARSFGVAIIFNRDHAWNDQWIFWVELFIRATLATVYHQIVIQFYFCLCF* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0980 129 PRINTS Major intrinsic protein family signature 60 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g0980 129 PRINTS Major intrinsic protein family signature 100 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g0980 129 Pfam Major intrinsic protein 66 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy10g0980 129 PANTHER AQUAPORIN PIP1-2-RELATED 65 122 - -
Ahy10g0980 129 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 65 122 IPR034294 -
Ahy10g0980 129 Gene3D Glycerol uptake facilitator protein. 54 124 IPR023271 -
Ahy10g0980 129 SUPERFAMILY Aquaporin-like 65 121 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0980 Ahy-Chr10 19117500 19118090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0980 66 122 Major Intrinsic Protein MIP AT1G01620 68.421 9.96e-24 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0980 K09872 - ahf:112717392 215.698