Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0979 ATGGCAACAACCTCAGTGCGCGTCAAAGAAGCTGTGCTCGTCACACCTTCTGACCCCACACCAACTGGGATTCTCCACCTCTCCGCTCTCGACTCCCAACTCTTTCTTCGCTTCACCGTTGAATATCTATTTGTTTACAGGCGATCCTCTGCCCTCGACCAGCCTGCCACCGTGTCACGTATGAAGTCGGCATTGGCAAGGGCGCTCGTTCCGTACTATCCCTTTGCCGGCCGAGTTCGCTCTAGGCCGGACGTCCCCAGCCTCGAGGTAGTCTGCCGGGCACAGGGCGCACTCTTCATCGACGCCTGCTCTGATGTGTACACTGCCAATGATTTTGAGAAGGCTCCCAAAACGGTTACACAATGGAGGAAGCTCTTGTCACTCTATGTTCCCGACGTTCTCAAAGGATCGCCGCCACTCGTCGTTCAGCTCACGTGGCTTGCCGATGGAGCCGCCGCAGTTGGCGTCGGAATCAACCACGCCCTCTGCGATGGCATAGGAAGCGCTGAGTTTCTCAACTACTTCGCTAATTTAGCTTCCCAAAGGTTTGGCCCTCGCGATTCTGATCTGAAGCCCAAGCCCGTCTGGGATCGCCACATCATGAACCCGCCGTCGAAGAAGAGCGAGCGGGCTAACACGTATAACCACCCTGAGTTTGCACGGGTTCCCGATCTCTGCGGGTTTTTGAACAAGGTCACCACCGGGCTCAGGCCCACCTCCATTGTGTTCAACAAGAGGCGCATCAACGAGCTCAAGGGAATAGCCCGTTACTCGAGCGAGTCGTCATCATCGTACACGTCTTTTGAGGTGCTAGCGGCCCATGTGTGGAGGAGCTGGGCCCGAGCATTGGGCTTTCCACCAAACCAGCAACTGAAGATTCTCTTTAGCATTAACGTGCGGAACCGGGTGAAACCGAACCTTCCAGAGGGGTACTACGGGAACGCGTTCGTTCTTGGGTGCGCACAGAGCAGTGCAAAGGAGCTTGTAGAAAAAGGAATCGGGTACTGTTCGGGTCTGGTGAAACGGGCCAAGGAGAGGGTGGATGGAGAATACGTGAGGAGGGTGAGTGAGTTGGTGTCCGAGTGGAGGGTGAGTCCTGACCCTGTTGGTGTGCTCATAGTTTCTCAGTGGTCTCGTTTGGGCCTTGAGAGGGTTGAGTTTATGGGTCGGCCCATTCATGTTGGGCCCATATGTTGGGATAGATACTGCTTGTTTCTTCCGGTGAGGGATGAGACGGAGAGTGTCAGGGTCGCCGTGGCTGTCCCTGCCGCCGCCTTTGACAGCTACCATCGCTTTATTGCAGAATCCACTTCATGA 1317 0.5558 MATTSVRVKEAVLVTPSDPTPTGILHLSALDSQLFLRFTVEYLFVYRRSSALDQPATVSRMKSALARALVPYYPFAGRVRSRPDVPSLEVVCRAQGALFIDACSDVYTANDFEKAPKTVTQWRKLLSLYVPDVLKGSPPLVVQLTWLADGAAAVGVGINHALCDGIGSAEFLNYFANLASQRFGPRDSDLKPKPVWDRHIMNPPSKKSERANTYNHPEFARVPDLCGFLNKVTTGLRPTSIVFNKRRINELKGIARYSSESSSSYTSFEVLAAHVWRSWARALGFPPNQQLKILFSINVRNRVKPNLPEGYYGNAFVLGCAQSSAKELVEKGIGYCSGLVKRAKERVDGEYVRRVSELVSEWRVSPDPVGVLIVSQWSRLGLERVEFMGRPIHVGPICWDRYCLFLPVRDETESVRVAVAVPAAAFDSYHRFIAESTS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0979 438 Gene3D - 231 432 IPR023213 -
Ahy10g0979 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 432 - -
Ahy10g0979 438 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 7 432 - -
Ahy10g0979 438 Pfam Transferase family 5 426 - -
Ahy10g0979 438 Gene3D - 1 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0979 Ahy-Chr10 18922893 18924850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0979 6 435 Monolignol Biosynthesis Gene Families AT5G48930 29.039 4.53e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0979 - - gmx:100803812 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1378 20 30862215 30864174 Ahy10g0979 10 18922893 18924850 hybridization
Ahy10g0979 10 18922893 18924850 Ahy17g0894 17 10411970 10414493 PCT
Ahy10g0979 10 18922893 18924850 Ahy7g0719 7 8189141 8191588 PCT
Ahy17g0894 17 10411970 10414493 Ahy10g0979 10 18922893 18924850 PCT
Ahy7g0719 7 8189141 8191588 Ahy10g0979 10 18922893 18924850 PCT