Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0973 ATGGAGAATTATGATCATTGTTCTTTATTTCTAGACCCTTCACAAACACTGCCTCATGTCTCAGATTGTAATTCTCTTCATCATCAATTTGGTGGTGAGTTTCATTCATGGCCGGCACCGGTCGAAATGGTGGCCGGAGACAGAGCTGCTAGTGCTTCCAAGAGCCATAGTCAGGCCGAGAAGCGGCGCAGGGACCGGATCAATGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGATGGACAAGGCAGCTTTACTAGGAAGTGTGATAGAGCAAGTGAAGGATCTAAAGAGAAAAGCAATTGAAGTTAGCAAAGCCATAACCGTTCCAACTGAATCCGACGAAATAACAATCGAATATGATCCCAGTGCGCGTGACGAGAGCCTAAAGATGAAGAACAAAGTTGTGATCAAGGCATCTGTTTGCTGCGACGATCGGCCGGAGCTGTTCTCGGAACTAATCCAAGTCCTAAAAGGATTAAGGCTGACGGCAGTTAGAGCTGACATAGCAAGTGTTGGTGGAAGAATGAAAGGCACATTTTTGCTTTGTTCTAAGGATAATGAAAAGGTTGTTTGCCTTGGTACTCTCAAGCATTCACTTAAATCAGTTGTGACAAAAATTGCTTCATCTTCCATTGCAACAAATTGGCCTACTAGAAGTAAGAGGCAAAAGTTCTTCTTACCTTCTCATTTTATATAG 711 0.4276 MENYDHCSLFLDPSQTLPHVSDCNSLHHQFGGEFHSWPAPVEMVAGDRAASASKSHSQAEKRRRDRINAQLTSLRKLIPKSDKMDKAALLGSVIEQVKDLKRKAIEVSKAITVPTESDEITIEYDPSARDESLKMKNKVVIKASVCCDDRPELFSELIQVLKGLRLTAVRADIASVGGRMKGTFLLCSKDNEKVVCLGTLKHSLKSVVTKIASSSIATNWPTRSKRQKFFLPSHFI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0973 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 100 IPR011598 GO:0046983
Ahy10g0973 236 PANTHER TRANSCRIPTION FACTOR BHLH51 25 235 - -
Ahy10g0973 236 SMART finulus 57 106 IPR011598 GO:0046983
Ahy10g0973 236 PANTHER TRANSCRIPTION FACTOR BHLH30 25 235 IPR045847 GO:0003700|GO:0006355
Ahy10g0973 236 CDD bHLH_AtAIG1_like 47 122 - -
Ahy10g0973 236 Pfam Helix-loop-helix DNA-binding domain 54 100 IPR011598 GO:0046983
Ahy10g0973 236 Gene3D - 46 109 IPR036638 GO:0046983
Ahy10g0973 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 103 IPR036638 GO:0046983
Ahy10g0973 236 CDD ACT_UUR-ACR-like 144 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0973 Ahy-Chr10 18446122 18447211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0973 30 235 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 48.357 3.31e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy10g0973 HLH 5.00E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0973 - - adu:107469423 468.774