Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0972 ATGCAGAACCAGAACCAGGCTTTGCAACATGTGATGAGAAAGAACAACCACATATCTGAAAACAAGAAAGAAAGATGGAAGACTATTGTGTTCTTCAATGTTCACTCCTTCTGGATTCTTGTTCTTATGCTGCTACTGCTGCTGCTTCATTCCACAGTTATGAATCCAGTTTCATGTGAAGATGATCGCTGGGATGGAGTGGTCGTAACAGAATCGAATTTCCTAGCACTTCAAGCCTTCAAGGAAGAGCTCATTGACCCAAAAGGATTCTTGAGAAGTTGGAATGACACCGGCTACGGTGCATGTTCCGGAAGCTGGAATGGCATAAAGTGTGCAAAGGGACAAGTTATAGTAATCCAGCTTCCATGGAAGGGATTGCGCGGCCGAATAACGGAACGGATTGGACAGCTTCAGGGTCTCCGGAAGCTTAGTCTTCACGATAACCGAATCGGCGGCGCAATCCCTTCGTCCTTGGGGATTCTCCCAAGCCTCAGAGGTATTCAGTTATTTAACAATATGTTAACTGGTTCAATCCCTCTTTCAATTGGTTACTGCCCTTTGCTTCAGTCTCTTGACTTAAGCAACAATTTTCTCACTGGAACAATCCCTGATAGCATTGCCAATTCCACAAAGATTTATTCTCTTAACCTTAGCTTCAATTCCTTCCATGGTTCCATTCCAATTAGCCTCACTGGCTCGCGTTCGCTGACGTTTCTTTCGCTTCAGCACAATAACCTCTCTGGATCCTTGCCTAATTCATGGGGTGGTGATGGTAGCATGAATAATGGCCCCTTCTTTAGGCTTCAAAGTTTGATTCTTGATCATAACTTTTTCACTGGCATTGTTCCTTCTTCTTTGGGAAGACTAAGAGAACTGAATGAGATTTCCCTTGGTCATAATCGGTTTATTGGAGCTATACCAAATGAATTAGGAACACTTTCTAGGCTCGAATCGTTTGACTTTTCGAATAATGAACTTAATGGAAGCTTGCCTGCTACACTCTCTAATTTATCCTCACTAAAACTATTGAATTTAGATAACAACCATCTTGGTAACCAAATACCAGAAGCTTTAGGGAAACTGCATAATCTTTCTGTTCTGATTCTGAGTAGGAACAAGTTTAGTGGTCATGTTCCTGCAAGTATTGGAAAGATTTCCGCGCTTTCACAGCTCGATTTGTCAATGAATAATCTCAGCGGAGAAATTCCATTATCTCTTGGGACACAAGTTAGTCTTAAGTTTTTCAATGTGTCTTACAACAATCTCTCAGGTCCCGTTCCAACTATGCTTGCTAAGAAATTTAACTCAAGTTCCTTTGTGGGAAACAATCAATTATGTGGTTATAGCCTTTCATCTCCATGTCTTGCACCTGCTCCATCAGATGAAGTTCTAGCACCGTTTCCACATCAAGAGTCGAAAGATCGCCATCATAGGAAACTAGGTACCAAAGACAAGATTCTCATAGCAGCAGGGGCACTGCTCTTAGTCCTCATTACACTATGCTGCATCCTGCTCTTCTGCTTGATCAGAAAGAGGGCGAATTCTACGGCGGATAATGGAAAGGCCACAAGGAGAGCTGCTGGTACGACTAGGACAGAAAGAGGAGTCGCGCTGCCTGTTTCTTCTGGTGAAGTTGAAGAGGGCGGCGATGCTGGAGGGAAGCTAGTCCATTTTGATGGACCAATTAAGTTTACAGCTGACGATCTCTTGTGCGCAACGGCGGAAATAATGGGAAAGAGCACCTATGGAACTGTGTACAAGGCTACAATGGAGGATGGAAGGCAAGTTGCAGTGAAGAGATTGAGAGAAAAGATCACAAAGAGTCAGAGAGAATTTGAATCGGAAGTTTGTGTTCTTGGGAGAATTAGACATCCCAATCTTTTGGCTCTAAGGGCCTATTACTTGGGACAAAAAGGGGAAAAGCTCCTTGTTTTTGATTACATGCCTAGAGGAAGCCTTGCTTCTTTCCTACATGTTCTTAGACCTGAAACATACATTGATTGGCCAACAAGGATGAAAATTGCGCAGGGAATTGCGCGTGGCTTGTTTTACCTTCATTCGAAGGCGAACATCATACATGGAAACCTTACATCCAGCAATGTGCTGCTTGATGAGAACACAGATGCTAAGATAGCAGATTTTGGCCTTTCTAGGTTGATGACAGCTGCTGCTAATTCCAATGTGATAGCTACAGCCGCAGCACTAGGATATCGCGCGCCTGAGCTCTCGAAACTCAAGAAGGCTAACACAAAATCTGATATATACAGCTATGGTGTGATCTTGCTGGAAATCTTGACAGGAAAGTCACCAGGTGAAACTAGGAATGGCTTGGATTTGCCTCAGTGGGTTGCTTCTATTGTCAAAGAAGAGTGGACAAATGAGGTTTTCGATTCGGATTTGATGAGGGACAAGGCATCATCCTCAACAGTTAATGATGAGTTGCTTAACACCTTGAAGCTTGCTTTGCACTGCGTTGATCCTACACCGTCGCCACGGCCGGAAGCTCACCAAATTCTCCAGCAGCTAGAAGAGATTAGGCCAGAGTTACCACCAGTTAGCCCTGGAGAAGAGTCTTGGCATCATGTTTAG 2589 0.4372 MQNQNQALQHVMRKNNHISENKKERWKTIVFFNVHSFWILVLMLLLLLLHSTVMNPVSCEDDRWDGVVVTESNFLALQAFKEELIDPKGFLRSWNDTGYGACSGSWNGIKCAKGQVIVIQLPWKGLRGRITERIGQLQGLRKLSLHDNRIGGAIPSSLGILPSLRGIQLFNNMLTGSIPLSIGYCPLLQSLDLSNNFLTGTIPDSIANSTKIYSLNLSFNSFHGSIPISLTGSRSLTFLSLQHNNLSGSLPNSWGGDGSMNNGPFFRLQSLILDHNFFTGIVPSSLGRLRELNEISLGHNRFIGAIPNELGTLSRLESFDFSNNELNGSLPATLSNLSSLKLLNLDNNHLGNQIPEALGKLHNLSVLILSRNKFSGHVPASIGKISALSQLDLSMNNLSGEIPLSLGTQVSLKFFNVSYNNLSGPVPTMLAKKFNSSSFVGNNQLCGYSLSSPCLAPAPSDEVLAPFPHQESKDRHHRKLGTKDKILIAAGALLLVLITLCCILLFCLIRKRANSTADNGKATRRAAGTTRTERGVALPVSSGEVEEGGDAGGKLVHFDGPIKFTADDLLCATAEIMGKSTYGTVYKATMEDGRQVAVKRLREKITKSQREFESEVCVLGRIRHPNLLALRAYYLGQKGEKLLVFDYMPRGSLASFLHVLRPETYIDWPTRMKIAQGIARGLFYLHSKANIIHGNLTSSNVLLDENTDAKIADFGLSRLMTAAANSNVIATAAALGYRAPELSKLKKANTKSDIYSYGVILLEILTGKSPGETRNGLDLPQWVASIVKEEWTNEVFDSDLMRDKASSSTVNDELLNTLKLALHCVDPTPSPRPEAHQILQQLEEIRPELPPVSPGEESWHHV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0972 862 Gene3D Ribonuclease Inhibitor 185 259 IPR032675 -
Ahy10g0972 862 Pfam Leucine rich repeat N-terminal domain 75 111 IPR013210 -
Ahy10g0972 862 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 8 854 - -
Ahy10g0972 862 SUPERFAMILY L domain-like 110 452 - -
Ahy10g0972 862 Gene3D Transferase(Phosphotransferase) domain 1 649 850 - -
Ahy10g0972 862 Gene3D Ribonuclease Inhibitor 72 184 IPR032675 -
Ahy10g0972 862 Gene3D Ribonuclease Inhibitor 260 460 IPR032675 -
Ahy10g0972 862 ProSiteProfiles Protein kinase domain profile. 571 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0972 862 Pfam Leucine rich repeat 267 326 IPR001611 GO:0005515
Ahy10g0972 862 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Ahy10g0972 862 SMART LRR_typ_2 337 360 IPR003591 -
Ahy10g0972 862 SMART LRR_typ_2 137 161 IPR003591 -
Ahy10g0972 862 SMART LRR_typ_2 361 385 IPR003591 -
Ahy10g0972 862 SMART LRR_typ_2 234 256 IPR003591 -
Ahy10g0972 862 SMART LRR_typ_2 313 336 IPR003591 -
Ahy10g0972 862 SMART LRR_typ_2 265 288 IPR003591 -
Ahy10g0972 862 SUPERFAMILY Protein kinase-like (PK-like) 575 851 IPR011009 -
Ahy10g0972 862 Pfam Protein tyrosine and serine/threonine kinase 574 842 IPR001245 GO:0004672|GO:0006468
Ahy10g0972 862 Gene3D Phosphorylase Kinase; domain 1 577 648 - -
Ahy10g0972 862 CDD STKc_IRAK 577 845 - -
Ahy10g0972 862 PRINTS Leucine-rich repeat signature 337 350 - -
Ahy10g0972 862 PRINTS Leucine-rich repeat signature 188 201 - -
Ahy10g0972 862 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 8 854 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0972 Ahy-Chr10 18194145 18197252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0972 64 847 Receptor kinase-like Gene Family AT3G51740 62.262 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy10g0972 PK_Tyr_Ser-Thr 2.10E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0972 - - aprc:113851294 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1313 20 27141863 27144976 Ahy10g0972 10 18194145 18197252 hybridization
Ahy10g0972 10 18194145 18197252 Ahy17g0859 17 9873477 9876660 PCT
Ahy10g0972 10 18194145 18197252 Ahy7g0687 7 7759072 7762178 PCT
Ahy17g0859 17 9873477 9876660 Ahy10g0972 10 18194145 18197252 PCT
Ahy7g0687 7 7759072 7762178 Ahy10g0972 10 18194145 18197252 PCT