Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0952 ATGCCTGAATCAAATTTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAAATCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTCCTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAAGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTATCAAAGAGTTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTACCAGTTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCATTGTTTCTCAACAACAATCAATTTGAAGGTGAAATTCCTCAGAATCTTGAAAATTTTCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGATTCATGGGTTATAGAAAGACAACACCTGATGCTTGA 489 0.4008 MPESNLDGAYTALQAWKSAITDDPKKNLGTWVGPNVCSYKGVFCDFPEDEMGASASAFPVVASIDLNHANLQGTLIKELSLLTDMSLFHLNSTSYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLENFPASVINLANNKLSGNIPASFGFMGYRKTTPDA* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0952 162 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 94 155 - -
Ahy10g0952 162 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 4 93 - -
Ahy10g0952 162 Pfam Leucine rich repeat N-terminal domain 10 45 IPR013210 -
Ahy10g0952 162 Gene3D Ribonuclease Inhibitor 9 157 IPR032675 -
Ahy10g0952 162 PANTHER LRR/EXTENSIN 94 155 - -
Ahy10g0952 162 PANTHER LRR/EXTENSIN 4 93 - -
Ahy10g0952 162 SUPERFAMILY L domain-like 10 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0952 Ahy-Chr10 17616605 17617248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0952 5 153 Trihelix Transcription Factor Family AT3G19020 39.796 7.22e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0952 - - ahf:112805894 318.161