Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0948 ATGTCGCCGGCGGCGGGTGTCAACGTCCCCCTCCTGCCGGAATCCACCGGATCCTCTACTCAACCGGCGTCAGTCTCTGGCGCCGTCTTCAACGTGGCGACGACCATCGTCGGCGCAGGAATCATGTCGATCCCGGCGATCCTAAAGGTCCTCGGCGTTATACCTGCGTTTGCCATGATTGCAGTGATCGCAGTTCTCGCTGAAGTGTCAGTTGAGTTTCTGTTGAGGTTCACGCACTCCGGCAAAACGACGACGTACGCCGGCGTCATGAGAGAAGCGTTCGGAACCTTCGGAGCACTTGCCGTACAAGTTTGTGTCATCGTCACAAACGTTGGAGCCTTGATTCTATACCTAATTATTATTGGGGATGTGCTATCTGGAAAGGGAAATGAAGGTGGAGAAGTGCACTTGGGCCTTCTGCAGCAGTGGTTTGGGATTCATTGGTGGAATTCCAGGGAATTTGCTTTGTTCATAACCTTGGTCTTTGTTATGCTTCCATTGGTCTTGTACAAACGTGTAGAATCCTTGAAGTACAGTTCAGCAGTGTCAACTTTTCTGGCAGTGGTGTTTGTTGCAATATGTTCTGGGATGGCAGTTGTTGCAGTCTTGCAAGGAAAAACACAAACCCCAAGATTGTTTCCTCGCTTAGATTACCAAACATCCTTCTTTGATCTCTTCACGGCAGTTCCAGTTGTAGTTACGGCCTTCACATTTCATTTCAATGTGCATCCAATTGGGTTTGAGCTTGCCAAGGCATCCCACATGACCAAAGCGGTTCGACTAGCCTTGATGCTCTGTGCTGTCATATACTTTGCAATCGGTCTATTCGGGTACCTCTTATTCGGAGACTCGACACAATCGGACATTCTGATCAATTTCGATCAGAATGCTGGTTCTGCAGTTGGTTCCTTGCTCAATGGTGTGGTCCGCATAAGCTATGCATTACACATCATGCTGGTGTTTCCTCTTTTGAACTTCTCCCTGAGAGCCAACATAGATGAACTCCTCTTCCCCAAGAAGCCTATGCTTGCCAATGACAACAAAAGATTTGTGATCCTTACTCTGGTGCTTCTAGTCGTCAGCTACCTTGCCGCCATAGCTATTCCGGATATTTGGTACTTCTTTCAGTTTCTGGGATCCACAACTGCGTTGTGCCTTGCCTTTGTTTTCCCAGGAGCTATTGTTTTAAGGGATGCTTATGAGGTATCAACGAGAAGGGACAAAATTATAGCACTAGTTATGATTATACTAGCTGTAGTAACAAGTGTGATGGCCATTTCCACCAATGTATATAATGCTTTGAGTAGCAAGTCATGA 1317 0.4715 MSPAAGVNVPLLPESTGSSTQPASVSGAVFNVATTIVGAGIMSIPAILKVLGVIPAFAMIAVIAVLAEVSVEFLLRFTHSGKTTTYAGVMREAFGTFGALAVQVCVIVTNVGALILYLIIIGDVLSGKGNEGGEVHLGLLQQWFGIHWWNSREFALFITLVFVMLPLVLYKRVESLKYSSAVSTFLAVVFVAICSGMAVVAVLQGKTQTPRLFPRLDYQTSFFDLFTAVPVVVTAFTFHFNVHPIGFELAKASHMTKAVRLALMLCAVIYFAIGLFGYLLFGDSTQSDILINFDQNAGSAVGSLLNGVVRISYALHIMLVFPLLNFSLRANIDELLFPKKPMLANDNKRFVILTLVLLVVSYLAAIAIPDIWYFFQFLGSTTALCLAFVFPGAIVLRDAYEVSTRRDKIIALVMIILAVVTSVMAISTNVYNALSSKS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0948 438 PANTHER AMINO ACID TRANSPORTER 3 436 - -
Ahy10g0948 438 Pfam Transmembrane amino acid transporter protein 23 427 IPR013057 -
Ahy10g0948 438 MobiDBLite consensus disorder prediction 1 23 - -
Ahy10g0948 438 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0948 Ahy-Chr10 17465136 17467910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0948 1 432 Amino Acid or Auxin Permease AAAP Family AT3G56200 59.447 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0948 - - gmx:100815694 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1281 20 25419117 25421893 Ahy10g0948 10 17465136 17467910 hybridization
Ahy10g0948 10 17465136 17467910 Ahy17g0847 17 9791366 9794754 PCT
Ahy10g0948 10 17465136 17467910 Ahy7g0674 7 7682394 7685607 PCT
Ahy17g0846 17 9784383 9787264 Ahy10g0948 10 17465136 17467910 PCT
Ahy7g0673 7 7675196 7678357 Ahy10g0948 10 17465136 17467910 PCT