Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0934 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTATTGCACGAGAAGCTGCAACTTCTTCGTTCCATTACTAACTCTCATGCTCTTAACAAGACGTCGATTATAATCGATGCATCAAAGTACATCAGAGATCTAAAGCAAAAAGTAGAAAGACTCAATCAAGACATGGCGGCTGCACAAACATCCACTCACCAAAATCCTTTGCCTATGGTAAAAGTAGAAACCCTAGAGAAGGGGTTTCTTGTAAACGTGGTGTCAGCAAAGAGTTGTCCAGGTCTTCTTGTTTCCATATTGGAGGTGTTTGAAGAGATGGGTCTCACTGTTATGGAAGCTAGGGTTTCTTGCACAGACACTTTTCGCTTTCAAGCTGTTGGAGGAGAAAATGAAGAGGATGGTGAGAGTATTATTGATGCACAAGCTGTGAAACTAGCAGTGGGGCAAGCAATCAAGAATTGGAGCCAACAAAGTACTGATGATGATGATGATCATGATGATGATCAACAGTGA 504 0.4187 MVSREQKRAALLHEKLQLLRSITNSHALNKTSIIIDASKYIRDLKQKVERLNQDMAAAQTSTHQNPLPMVKVETLEKGFLVNVVSAKSCPGLLVSILEVFEEMGLTVMEARVSCTDTFRFQAVGGENEEDGESIIDAQAVKLAVGQAIKNWSQQSTDDDDDHDDDQQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0934 167 Gene3D - 2 67 IPR036638 GO:0046983
Ahy10g0934 167 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 157 - -
Ahy10g0934 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 66 IPR036638 GO:0046983
Ahy10g0934 167 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 157 - -
Ahy10g0934 167 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0934 Ahy-Chr10 16919482 16922122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0934 5 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.231 1.35e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0934 - - tcc:18600910 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1270 20 25048165 25050837 Ahy10g0934 10 16919482 16922122 hybridization
Ahy10g0934 10 16919482 16922122 Ahy17g0842 17 9725898 9727955 PCT
Ahy10g0934 10 16919482 16922122 Ahy7g0670 7 7615736 7617626 PCT
Ahy17g0842 17 9725898 9727955 Ahy10g0934 10 16919482 16922122 PCT
Ahy7g0670 7 7615736 7617626 Ahy10g0934 10 16919482 16922122 PCT