LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy10g0899	ATGCCTTCTTCAGCAATGATACCTACCTGCATATCCTCGTCAAAGGATATGCAGGTCGACATCGAGAAGAACCAAAGCCATGTAAGATGTCAGTGGGTACTCAACCCTCCTGAGCCACCGAATCCTTGGCGCATGGTCACGGACTTAGCGGAAAAAAGTATCTTGCGTTGGCGCAAGAACTTTTCTACGCTGAGACATGAATCATGGGCCAGGGTCATGTTTTCAACTTTGCAGAGGATTTTTCCGATCCTTGTGTGGGGAAGAAGTTACACTGCCACTAAATTCAGGAAAGACTTGCTTGCTGGTCTCACTATTGCAAGTCTCTGTATTCCCCAGAGCATTGGGTACGCGACCTTAGCAAACCTTGATCCTCAATATGGCCTTTATACGAGTGTTGTGCCACCGCTGATCTATGCCGTAATGGGAACCGCTCAAGAGATAGCAATAGGGCCAGTGGCGGTGGTGTCGTTGCTCTTGTCTTCGATGGTTCAGAAATTAAGAGATCCTGTTTTTGATCCAATCGCTTACACCAAACTCATCTTGCTTGCCACTCTCTTTGCTGGTATTTTTCAGACCGCCTTTGGCCTTTTCAGGCTGGGGTTCCTTGTGGATTTCCTGTCACACGCAGCAATAGTTGGATTTGTGGGAGGAGCAGCCATTGTTATTGGTCTTCAACAGTTGAAGGGACTCTTAGGAGTTTCTCACTTTACTACCAAAACCGACATTATCTCTGTCATCAAAGCTGTTTGGCAAGCAATTCATAATCCCTGGAATCCTCGCAATTTCATACTAGGATGCTCATTCCTGGTCTTCATCCTATCTACTAGATTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATTTCCCCTCTCATATCAGTTGTAGTATCAACTTTGTTGGTTTTTGTGACACATGCTGATAAGAATGGAGTTAAAATTGTAAAACATGTCAAAGGAGGATTAAATCCAAGCTCCATTCATATGTTGGATTTCAATAATCCCTATGTTGGAGAAGTCGCCAAAATTGGACTAATCGTTGCTGTTGTTGCCCTCACTGAATCTGTTGCTGTTGGACGGTCTTTCGCATCCATCAAAGGGTACCAACTTAATGGGAACAAGGAAATGGTGTCAATTGGCATCACCAACATCATAGGATCTTTCACCTCTTGCTATGTTGCTACTGGTTCATTCTCCCGAACGGCGGTGAATTATGCAGCTGGATGTGAAACATTGGTGTCAAACATAGTGATGGGAATGACAGTGTTGATATCGTTGCAGTTCATGACAAAGCTTTTGTATTACACACCAACTGCCATTCTTGCTTCGGTCATCCTTTCTGCACTGCCAGGCCTCATAGATATCAATGAAGCTCTCAGAATATGGAAGCTTGATAAGTTTGACTTTCTTGCTTGTCTTAGTGCCTTCTTTGGTGTACTCTTTGCATCTGTGGAGATTGGTCTTCTTGTTGCGGTGGCAGTATCGTTTTCAAAGATAATTGTGATATCAATACGACCAGGGACAGAAACTCTAGGAAAATTACCGGGAACCGATTTGTTCGGTGATGTTAATCAGTATCCAATGGCTGTTAAGATCCCTGGCCTTCTCATTATACGTCTTAAGTCTGCCTTGCTTTGCTTTGCAAATGCCACTTTCGTTAAAGAAAGGATCATGAAATGGGTCAGTGAGGAAGAAGAATCGATGGATGACAAGGGAAATGCAATAAGCCAAATTCAATTCGTAATCCTTGACATGTCCAATTTGGTGAACATTGACACATCTGGAATTGCTGCTCTTGAGGAACTGCACAAGAGTTTGTCCTCACATAGGAAGCAGTTAGCCATTGCGAACCCAAGGTGGCAAGTGATTCACAAGCTAAAGGTCTCAAACTTTGTCAACAAAATCAATGGCAGGGTCTTTCTCACTGTTGAAGAAGCTGTTAGGTCCAAGATCCAGTGCTGA	1968	0.4365	MPSSAMIPTCISSSKDMQVDIEKNQSHVRCQWVLNPPEPPNPWRMVTDLAEKSILRWRKNFSTLRHESWARVMFSTLQRIFPILVWGRSYTATKFRKDLLAGLTIASLCIPQSIGYATLANLDPQYGLYTSVVPPLIYAVMGTAQEIAIGPVAVVSLLLSSMVQKLRDPVFDPIAYTKLILLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGVSHFTTKTDIISVIKAVWQAIHNPWNPRNFILGCSFLVFILSTRFLGKKKKKLFWLASISPLISVVVSTLLVFVTHADKNGVKIVKHVKGGLNPSSIHMLDFNNPYVGEVAKIGLIVAVVALTESVAVGRSFASIKGYQLNGNKEMVSIGITNIIGSFTSCYVATGSFSRTAVNYAAGCETLVSNIVMGMTVLISLQFMTKLLYYTPTAILASVILSALPGLIDINEALRIWKLDKFDFLACLSAFFGVLFASVEIGLLVAVAVSFSKIIVISIRPGTETLGKLPGTDLFGDVNQYPMAVKIPGLLIIRLKSALLCFANATFVKERIMKWVSEEEESMDDKGNAISQIQFVILDMSNLVNIDTSGIAALEELHKSLSSHRKQLAIANPRWQVIHKLKVSNFVNKINGRVFLTVEEAVRSKIQC*	656

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy10g0899	655	Pfam	STAS domain	528	648	IPR002645	-
Ahy10g0899	655	PANTHER	SULFATE TRANSPORTER 2.1	62	651	-	-
Ahy10g0899	655	ProSiteProfiles	STAS domain profile.	547	652	IPR002645	-
Ahy10g0899	655	SUPERFAMILY	SpoIIaa-like	532	650	IPR036513	-
Ahy10g0899	655	Pfam	Sulfate permease family	95	475	IPR011547	GO:0016021
Ahy10g0899	655	TIGRFAM	sulP: sulfate permease	82	645	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Ahy10g0899	655	PANTHER	SULFATE TRANSPORTER	62	651	IPR001902	GO:0015301\|GO:0016020\|GO:0055085
Ahy10g0899	655	CDD	STAS_SulP_like_sulfate_transporter	528	643	-	-
Ahy10g0899	655	Gene3D	STAS domain	507	653	IPR036513	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy10g0899	Ahy-Chr10	14781438	14809965	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy10g0899	3	651	Inorganic Solute Cotransporters	AT5G10180	65.948	0.0	884

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy10g0899	K17469		-	gmx:100817831	1014.22

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy20g1214	20	22605699	22638052	Ahy10g0899	10	14781438	14809965	hybridization

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