Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0869 ATGACTTCTAAAAAGAGGAAAATAGCATGGTCAGAGAAAGAGGACAATCTGCTACGAGATGCTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAAGAGGCAACTTTTCTGTTAAGAGAACGGCTAAACAGATAAATCAACTTCCTCCTGAATGGACCGACCAGTTTGATTTTGGCATTCAGACTATTGATGTAATTCAAGCTAGACATGGCCTTATAAATTATAGGAACAGATAA 246 0.3862 MTSKKRKIAWSEKEDNLLRDAVQRFGEGHWATIAKRGNFSVKRTAKQINQLPPEWTDQFDFGIQTIDVIQARHGLINYRNR* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0869 81 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 50 - -
Ahy10g0869 81 SUPERFAMILY Homeodomain-like 5 56 IPR009057 -
Ahy10g0869 81 CDD SANT_TRF 10 48 - -
Ahy10g0869 81 ProSiteProfiles Myb-like domain profile. 2 59 IPR001005 -
Ahy10g0869 81 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 63 IPR017930 -
Ahy10g0869 81 Gene3D - 1 57 - -
Ahy10g0869 81 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 50 - -
Ahy10g0869 81 Pfam Myb-like DNA-binding domain 9 48 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0869 Ahy-Chr10 12785593 12789693 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy10g0869 Myb_DNA-binding 3.00E-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0869 - - adu:107461104 93.5893