Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0839 ATGGCAATTACACATTTTGGTAGTACGTTTGCAACTCAATGGGGAATTCGTCCTCAGGTTTTCGCAAGATCCAGCATAGTAAGCAAGACTACGTCATCCAGCCACAATGTTACAAGCAGGGTGAGCTTTATAGCGGCCCCAGCTTCAAGCTTTTTCTCCCGGGATTCCTCACGTGCACTATTTAACATGAGTTCATCTCAGACATATCACCGAAGGGGTTCAAGGTTGATAGTTAGAGCAGAAACAGATTACTATTCCGTCCTTGGCGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGGAATTATCATCCAGATGTGAACAAAGATCCTGGTGCAGAACAGAAATTTAAGGACATTAGCAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCGATATATGATCAATATGGAGAGGCCGGGCTTAAAGGTTCAGGAATGGGCATGGGGGATTTCAGCAGTCCTTTTGATATATTTGAAACGCTTTTTGAGGGCATGGGTGGCATGGGTGGCATGGGTTCAAGAGGTGCTTGGAATGGAGCAATTGACGGTGAAGATGAATATTACAGTCTCGTTTTGAACTTCAAAGAAGCAGTTTTTGGAGTAGAAAAGGAGATAGAGATTAGGCGGTTAGATAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCGGGGACCAAGTCATCCAGATGTAGCACTTGTGGCGGTCAAGGTCGTGTTGTCTCATCAACCAGGACCCCTCTAGGCATCTTTCAGCAGTCTATGACCTGCTCTTCCTGCAATGGAACCGGAGAAACATCAACACCATGCAGCACATGTTCTGGGGATGGTCGTGTGAGGAAAACAAAACGGATAAGTCTGAAGGTTCCCCCTGGTGTGGATTCTGGTAGCCGTTTAAGAGTCCGGAATGAAGGCAATGCTGGAAGACGTGGCGGTGCACCTGGTGACCTCTTTGTAGTTATCGAAGTTATCCCAGATCCTGTCCTCAAACGAGATGACACCAACATTCTGTACACCTCCAAGGTGTCTTATATTGATGCTATCTTGGGAACTACAATCAAGGTTCCTACTGTAGATGGCATGGTGGATTTAAAAGTCCCGGCTGGGACTCAACCCGGCACGACGCTCGTTATGGCTCGGAAAGGTGTTCCGCTGCTGAATAAGAGTAACATGAGAGGTGATCAATTGGTTCGCGTGCAAGTCGAAATCCCCAAGAGACTGAGCAGTGATGAGAGAAAACTTATTGAGGAACTTGCTGATTTGAGCAAAGGAAAGAGTAAAGCTGCTGCTAGTGGTACTAGGAGATAA 1335 0.4599 MAITHFGSTFATQWGIRPQVFARSSIVSKTTSSSHNVTSRVSFIAAPASSFFSRDSSRALFNMSSSQTYHRRGSRLIVRAETDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSIYDQYGEAGLKGSGMGMGDFSSPFDIFETLFEGMGGMGGMGSRGAWNGAIDGEDEYYSLVLNFKEAVFGVEKEIEIRRLDSCGTCNGSGAKPGTKSSRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGDGRVRKTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGAPGDLFVVIEVIPDPVLKRDDTNILYTSKVSYIDAILGTTIKVPTVDGMVDLKVPAGTQPGTTLVMARKGVPLLNKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKSKAAASGTRR* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0839 444 Gene3D - 193 328 - -
Ahy10g0839 444 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Ahy10g0839 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 32 435 - -
Ahy10g0839 444 Gene3D DnaJ domain 80 183 IPR036869 -
Ahy10g0839 444 CDD DnaJ_zf 223 286 IPR001305 GO:0031072|GO:0051082
Ahy10g0839 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 290 IPR036410 -
Ahy10g0839 444 CDD DnaJ 83 136 IPR001623 -
Ahy10g0839 444 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Ahy10g0839 444 PRINTS DnaJ domain signature 103 118 IPR001623 -
Ahy10g0839 444 PRINTS DnaJ domain signature 139 158 IPR001623 -
Ahy10g0839 444 PRINTS DnaJ domain signature 85 103 IPR001623 -
Ahy10g0839 444 PRINTS DnaJ domain signature 119 139 IPR001623 -
Ahy10g0839 444 SUPERFAMILY Chaperone J-domain 79 185 IPR036869 -
Ahy10g0839 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 338 424 IPR008971 GO:0006457|GO:0051082
Ahy10g0839 444 Hamap Chaperone protein DnaJ [dnaJ]. 80 436 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Ahy10g0839 444 Pfam DnaJ domain 83 144 IPR001623 -
Ahy10g0839 444 TIGRFAM DnaJ_bact: chaperone protein DnaJ 83 429 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Ahy10g0839 444 Gene3D - 333 443 - -
Ahy10g0839 444 Gene3D - 223 286 - -
Ahy10g0839 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 191 346 IPR008971 GO:0006457|GO:0051082
Ahy10g0839 444 SMART dnaj_3 82 139 IPR001623 -
Ahy10g0839 444 ProSiteProfiles Zinc finger CR-type profile. 210 291 IPR001305 GO:0031072|GO:0051082
Ahy10g0839 444 Pfam DnaJ C terminal domain 198 413 IPR002939 -
Ahy10g0839 444 Pfam DnaJ central domain 223 286 IPR001305 GO:0031072|GO:0051082
Ahy10g0839 444 CDD DnaJ_C 194 416 - -
Ahy10g0839 444 PANTHER BNAA01G34580D PROTEIN 32 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0839 Ahy-Chr10 11924929 11929575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0839 84 146 C2H2 Transcription Factor Family AT1G74250 43.478 8.01e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0839 K03686 - gmx:100786143 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1135 20 18990030 18994625 Ahy10g0839 10 11924929 11929575 hybridization