Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0809 ATGAGAAATTTCATTGTTCAGCCAAATTCAAAAGGTGTGAGGACAACTTCACACAAGTTCAAGCTAAGTTTTTATATGAAAACTTCTGTCAGTACTCTCTCCAGTGAGACCTTTCAATTGAATCCTTTCCGATTTGTCTCCTTTACTGAAATTGAAGAAGTTGATGTTGTCAATTTGAATATCCTCCTAGATTGTGTTGGTCACATTGTTGGAAAGGAGGATGTTAGACCAATAGTTACAAAATCAGGTCAAGAAAGTAAATGCATGGCACTATACCTGGAGGATCTTGAAAAAAATAAGATCAAGTGTACTATATTTGGTGAAATGATTGGTAAGTTAACTCCATTTATCAATAAGGATGATGGTGAGCCACTGATCTTGGTCGCTCAACTCTTCAAGCCAAATCAGTACCTCAATCAGATTAATATTCAGAATAGTCTTTATGCCTCGAGAGTGTTCCTGAACCCTGATTTTCCTGATGTTGTTGCATTCAAGAATCGCCTACTGAAAGAAAGTAACATTGGATCCCAACGAATTAATCACATAGAGACCCAACCTCAGTATTCTGTGAGTGATGAACTTTCGGGAGGTTCCTTTCCAATCAATACAATTGAAGAAGTTTTGAACATGACTTATGAAGTCTCCACTTGGGTTTTAGCCACTATAGTGTCTGTTGATGTTGGCACCCGCGATTGGTATTATGCCTCGTGTAAGAATTGTCCTAGAAAAGTTGTGGAGAATAAAGGTCGATATTACTGTGAGCATTGTCGAAAAGTGGGATTTAATGCTCCGTTGAGGTATCGACTTAATGTTGTAGTCACTGATGGGACTGGATGCATTAATAAAATGCTTTGGAATCAAGAGGCAAAGATCATTCTCGAAAAATCTGCTAATGACATAAGGGATCTAATGAAAGATGCTGATGAGAATGCCTGCTTAAAAGCTTTTGAACCTATAATTGATAGGAAGTTTCTTTTTAAATTGTCTATCTCACAGAAAAATCTGACCTCTGTGGACCAAGCTTATAATGCTGTTAAGATTAGTGATGATGAGGCACTGATTGATCTCTATTCATCCCACAGTTCTTCCATAGATATTGGAGGGGTTGAACAAGGCCTTTCAAATGTAGTGTCTACAACTGGAAATAATGACCTCGACTTAGATGGGAATGGAGCTGCTATTGTTTCACTATCAAAGGATTCTGGCATTGAGAGCATCTTTGAAAGCGGCTTAAATACTCCTGGTAAATATGTTATAGCAGATTCTGCTCCAAACTTGGGTGTTAGTGGACTTACTAATCCGGAAGGCCAGGGATCCAGTAACAAGACTTTCAAACGTGGATCTACCAAGAGAAAAATTGAGTGA 1365 0.3824 MRNFIVQPNSKGVRTTSHKFKLSFYMKTSVSTLSSETFQLNPFRFVSFTEIEEVDVVNLNILLDCVGHIVGKEDVRPIVTKSGQESKCMALYLEDLEKNKIKCTIFGEMIGKLTPFINKDDGEPLILVAQLFKPNQYLNQINIQNSLYASRVFLNPDFPDVVAFKNRLLKESNIGSQRINHIETQPQYSVSDELSGGSFPINTIEEVLNMTYEVSTWVLATIVSVDVGTRDWYYASCKNCPRKVVENKGRYYCEHCRKVGFNAPLRYRLNVVVTDGTGCINKMLWNQEAKIILEKSANDIRDLMKDADENACLKAFEPIIDRKFLFKLSISQKNLTSVDQAYNAVKISDDEALIDLYSSHSSSIDIGGVEQGLSNVVSTTGNNDLDLDGNGAAIVSLSKDSGIESIFESGLNTPGKYVIADSAPNLGVSGLTNPEGQGSSNKTFKRGSTKRKIE* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0809 454 CDD RPA1_DBD_B_like 64 168 - -
Ahy10g0809 454 Pfam Domain of unknown function DUF223 1 53 IPR003871 -
Ahy10g0809 454 MobiDBLite consensus disorder prediction 429 454 - -
Ahy10g0809 454 Gene3D - 38 175 IPR012340 -
Ahy10g0809 454 SUPERFAMILY Nucleic acid-binding proteins 200 348 IPR012340 -
Ahy10g0809 454 PANTHER REPLICATION FACTOR A 1, RFA1 14 389 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy10g0809 454 Gene3D - 189 356 IPR012340 -
Ahy10g0809 454 PANTHER BNAC07G49340D PROTEIN 14 389 - -
Ahy10g0809 454 MobiDBLite consensus disorder prediction 429 444 - -
Ahy10g0809 454 CDD RPA1_DBD_C 218 350 IPR013955 -
Ahy10g0809 454 Pfam Replication factor-A C terminal domain 220 337 IPR013955 -
Ahy10g0809 454 SUPERFAMILY Nucleic acid-binding proteins 47 168 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0809 Ahy-Chr10 10768419 10771680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0809 42 336 Core DNA Replication Machinery Family AT4G19130 21.086 5.01e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0809 - - ahf:112718168 905.59