Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0778 ATGACATTAACATGTGCTAACAATTGTGCTGGTGATGCTGTGAGCGAAATGGGAAAGAAAGGTGGATTGTTTCGTTATGCTGATGGAGTTGACAAATTGCTATTGTTGTTTGGGACTATGGGTTGCATAGGGGATGGGCTACAAACACCTATCACAATGTTTGTTTTTGGGAGTTTGATTGATGATTATGCACGTGGTTCTGGAGATTCTGTTCCTAAGCATATCATAGACAAGGCATGTAGTCAGTACGCTCTCAAGTTGCTGTATATTTCCATCGGGGTTGCTGTATGTGCTTTTGTTGTTAATCCGTATATATATTCCAAGAGAATAACACAAACACGCTATTATTTTGCAGAAGCAGTATGTTGGACAAGAAGTGCAGAAAGACAAAGTTGTCGCATGAGAATTGAATATCTTAAATCAGTTCTGAAACAAGATGTTGGCTTCTTTGACAAGCAAACCGATAGTGATTCTTCAAAGACCTTCCAAGTAATTTCTACCATAACTTCTGATGCCCAAACAATCCAAGACACCATGGCTGATAAGATACCGAACTGTCTAGTTCACCTGTCAGCATTTTTTTCTAGCTTCATAGTAGGACTCTTCCTCTCATGGAGGCTTGTAATAGCTGCATTTCCATTCTCAATAATGATGATCATGCCAGCAATCATATTTGGGAAGGCAATGAAAGATCTTGGGGAGAAAATGAAGGATGCATATGGCATAGCAGGGAGCATAGCGGAACAAGCTATCTTGTCGATTCGAACGGTTTATTCATATGTTGCCGAGAAAGAAACACTAAAGAGGTATAGCTCTGCTCTTGAAAGGAGTATGGAGCTGGGAATAAAGCTAGGGAGAACAAAGGGTGTTGTAGTTGGTAGCTTTGGGTTGCTTTATGCTACTTGGGCATTTCAATCTTGGGTTGGAAGTGTTGTGGTTAGGACTAAAGGTGAAAGAGGTGGACTTGTGTTTGCTGCTCAAATTTGCATGATTTGGGGAGGACTGTCTCTGATGAATGCACTTCCAAATCTAACTTTCATTGTAGAGGCAAAAGTAGCAACAACCAGAATTTTCCAAATGATTGAGCAAATACCAATCATAAACTCACACAAACAAAAAGGAAGGATCTTAAGCCATGTGAGAGGAGAAATCACATTCACAAAAATTGACTTCACTTACCCATCACGACCGGACACACCGATTCTCCAAGGACTGGATCTGAAGTTTCCAGCATGTAAAACAATAGGCCTAGTTGGAGGCAGTGGTTCTGGAAAATCCACAATCATCTCTTTGATTGAAAGATTCTATGATCCTTTATATGGTGAGATATTGCTTGATGGACATGATATAAAGAGGCTTGAGCTTAAGTGGCTAAGGTCACAAATGGGACTTGTTAATCAGGAGCCTATTCTGTTTGCAACATCAATTAGGGAGAATATTCTGTTTGGCAAGGAAGGTGCTTCAATGGAAGCTGTTATAAATGCAGCTAAGGCTGCAAATGCACATGGTTTCATTGTTAAACTTCCTAGTGGATATGAAACTCAAGTGGGACAACTTGGGACTCAGTTATCTGGAGGACAAAAGCAAAGAATTGCAATAGCAAGGGCCCTAATTCGCAACCCGAAAATCCTACTCCTTGATGAAGCCACAAGTGCATTGGATTCAGAGTCTGAAAGAATAGTGCAAGAGGCCCTTGATTTGGCTTCAAGAGGCAGAACAACAATCATTGTAGCTCATCGCTTATCGACGATTCGAAATGCTGACTCGATAGTAGTCCTTCAATCAGGAAGAGTTGTTGAATCTGGCTCCCATGTTGAGCTACTCAAACTTAACAATGGACAAGGGGGTGCTTATAGCAAAATGCTAAAACTACAACAAACAAATCAAAATGAAGATTCAACATTGAATGATGTGAGCAAGAGTCCCCAAGTTATGTCATATTTAACAAGTCCAAGATCAATGCCAGGTACTCCAACTCATCATTCATTCACCTCACCGACACCAATATACTCAATCAGTGTTCTGGGGTCCCCTTTTGATGACTACACTGAGAATTCTGAGATTTCTTCAAAAGCAAGTTTCTCGCAATGGCGTTTGATAAGAATGAATTCCCCTGAGTGGAAGTATGCTCTGATAGGATGCTTAGGTGCTATTGGCTCTGGAATTTGCCAACCTTTTTACTCTTATTGCCTTGGATTCATTGCTTCTATCTACTTCATAACCGATCACTCGCGCATCGTCTCACAAATCAGGCTGTACTCATCAATTTTCTGCATCATAGCAGTTGTCAACTTCATATCAGGCCTAATTCAGCACTCGAGCTTCGCCATCATGGGCGAGAAATTGCTAAAGAGGGTGCGCGAGAATCTGCTAGAGAAAATCCTTACATTTGAAATAGGATGGTTTGATCAAGAAGATAACAGCAGTGCAGCCATCTGCGCTCGTTTGGCGTTAGATGCAAACTTGGTCAGGTCTCTTGTAGCAGAAAGAATGTCATTACTAGTTCAAGTATTTGTCACTGCCACCCTGGCTTTCGCACTCGGTTTATATGTCTCATGGAAGGTGGCAATGGTAATGATAGCTATGCAGCCCTTGATCATTGCTTGTTTCTATTCCAAATTCATGCTTATGAAAAGTATGTCAGGTAAAGCAAGAAAGGCTCAAAGTGAAGGTAGTCAATTAGCAATGGAAGCTACCATTAACCATAGAACTATTGCTGCATTTTCATCAGAGAAAAGGGTATTGAATTTGTTCAAAAATTCAATGAAAGGACCTCATTTGGAAACCGTAAAGCAATCATGGATTTCAGCTGCAATTTTGTCATTGTCACAGTTCATAACTACAGCTTCTATAACCTTAACATTTTGGTATGGAGGATTGCTACTAAACAAAAAGATGGTGAATTCAAATGACCTTTTGCAAGTTTTCTTAATACTGATGGGAACTGGAAGACAAATTGCTGAGACAGTAAGCATGACTTCGGACATAGCGAAAAGCGGGAAAGCCGTTAGCTCGATTTTTGCAATTTTGGACAGGAAAACTCAGATTGAACCTGAAGATCTTAGGCTTATGAAGTTCAGAAAGAACAACAACATAAAGGGTCATGTGAAGTTAAAAGATGTGTTCTTTTCATACCCATCAAGGCCAGAACAAATGATCCTAAAGGGTCTTAGTCTTGAAATTGAAGCTGGGAAAACAATTGCATTGGTGGGACAAAGTGGGTCAGGGAAATCCACTATCATTGGACTAATTGAAAGATTTTATGACCCAATTAATGGATCAATATTTATAGATGGTTGTGACATTAGGGAATTTGATTTGAGAAGTTTGAGGTTACATATTGCATTGGTGAGTCAAGAGCCTACACTCTTTGGTGGAACTATACGTGATAACATTGTGTATGGAAAGATTGATGCATCTGAAGATGAAATAAGAAAGGCAGTGCGTCTTGCAAATGCTCATGAGTTTATAAGTTCAATGAGAGATGGATATGACACATACTGTGGAGAAAGAGGAGTGCAGCTTTCAGGGGGACAAAAGCAAAGAATTGCAATTGCCAGAGCAATACTAAAGAACCCATCAATCCTTCTCATGGACGAAGCAACAAGTGCTCTCGACAGCGTTTCAGAGAATCTAGTGCAAGATTCCCTGGAGAAAATGATGGTTGGAAGAACATGTGTGGTTATTGCTCATCGTTTGTCTACAATTCAGAATGTGGACACCATTGCTGTGATCAAGAATGGGAAATTGGTGGAGCAAGGTTCACACTCCGAGTTAATGAATGTTGGAACAAAGGGTGCTTACTACTCCATGATTAGGTTACAACATGGGACTAACTCTACTAGCTGA 3849 0.4032 MTLTCANNCAGDAVSEMGKKGGLFRYADGVDKLLLLFGTMGCIGDGLQTPITMFVFGSLIDDYARGSGDSVPKHIIDKACSQYALKLLYISIGVAVCAFVVNPYIYSKRITQTRYYFAEAVCWTRSAERQSCRMRIEYLKSVLKQDVGFFDKQTDSDSSKTFQVISTITSDAQTIQDTMADKIPNCLVHLSAFFSSFIVGLFLSWRLVIAAFPFSIMMIMPAIIFGKAMKDLGEKMKDAYGIAGSIAEQAILSIRTVYSYVAEKETLKRYSSALERSMELGIKLGRTKGVVVGSFGLLYATWAFQSWVGSVVVRTKGERGGLVFAAQICMIWGGLSLMNALPNLTFIVEAKVATTRIFQMIEQIPIINSHKQKGRILSHVRGEITFTKIDFTYPSRPDTPILQGLDLKFPACKTIGLVGGSGSGKSTIISLIERFYDPLYGEILLDGHDIKRLELKWLRSQMGLVNQEPILFATSIRENILFGKEGASMEAVINAAKAANAHGFIVKLPSGYETQVGQLGTQLSGGQKQRIAIARALIRNPKILLLDEATSALDSESERIVQEALDLASRGRTTIIVAHRLSTIRNADSIVVLQSGRVVESGSHVELLKLNNGQGGAYSKMLKLQQTNQNEDSTLNDVSKSPQVMSYLTSPRSMPGTPTHHSFTSPTPIYSISVLGSPFDDYTENSEISSKASFSQWRLIRMNSPEWKYALIGCLGAIGSGICQPFYSYCLGFIASIYFITDHSRIVSQIRLYSSIFCIIAVVNFISGLIQHSSFAIMGEKLLKRVRENLLEKILTFEIGWFDQEDNSSAAICARLALDANLVRSLVAERMSLLVQVFVTATLAFALGLYVSWKVAMVMIAMQPLIIACFYSKFMLMKSMSGKARKAQSEGSQLAMEATINHRTIAAFSSEKRVLNLFKNSMKGPHLETVKQSWISAAILSLSQFITTASITLTFWYGGLLLNKKMVNSNDLLQVFLILMGTGRQIAETVSMTSDIAKSGKAVSSIFAILDRKTQIEPEDLRLMKFRKNNNIKGHVKLKDVFFSYPSRPEQMILKGLSLEIEAGKTIALVGQSGSGKSTIIGLIERFYDPINGSIFIDGCDIREFDLRSLRLHIALVSQEPTLFGGTIRDNIVYGKIDASEDEIRKAVRLANAHEFISSMRDGYDTYCGERGVQLSGGQKQRIAIARAILKNPSILLMDEATSALDSVSENLVQDSLEKMMVGRTCVVIAHRLSTIQNVDTIAVIKNGKLVEQGSHSELMNVGTKGAYYSMIRLQHGTNSTS* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0778 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 349 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g0778 1282 CDD ABC_6TM_Pgp_ABCB1_D2_like 700 1016 - -
Ahy10g0778 1282 Pfam ABC transporter transmembrane region 39 315 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g0778 1282 Pfam ABC transporter transmembrane region 711 979 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g0778 1282 Gene3D - 1022 1280 IPR027417 -
Ahy10g0778 1282 CDD ABC_6TM_Pgp_ABCB1_D1_like 35 357 - -
Ahy10g0778 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1030 1275 IPR027417 -
Ahy10g0778 1282 Pfam ABC transporter 1054 1203 IPR003439 GO:0005524
Ahy10g0778 1282 SMART AAA_5 411 597 IPR003593 -
Ahy10g0778 1282 SMART AAA_5 1063 1249 IPR003593 -
Ahy10g0778 1282 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 711 998 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy10g0778 1282 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524
Ahy10g0778 1282 CDD ABC_MTABC3_MDL1_MDL2 1036 1275 - -
Ahy10g0778 1282 SUPERFAMILY ABC transporter transmembrane region 23 363 IPR036640 GO:0005524|GO:0016021
Ahy10g0778 1282 PANTHER OS04G0481700 PROTEIN 27 1277 - -
Ahy10g0778 1282 Pfam ABC transporter 402 551 IPR003439 GO:0005524
Ahy10g0778 1282 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 625 IPR027417 -
Ahy10g0778 1282 CDD ABC_MTABC3_MDL1_MDL2 384 625 - -
Ahy10g0778 1282 ProSitePatterns ABC transporters family signature. 1175 1189 IPR017871 GO:0005524
Ahy10g0778 1282 Gene3D - 374 626 IPR027417 -
Ahy10g0778 1282 SUPERFAMILY ABC transporter transmembrane region 698 1017 IPR036640 GO:0005524|GO:0016021
Ahy10g0778 1282 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 27 1277 IPR039421 -
Ahy10g0778 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Ahy10g0778 1282 Gene3D ABC transporter type 1, transmembrane domain 23 1001 IPR036640 GO:0005524|GO:0016021
Ahy10g0778 1282 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1036 1272 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0778 Ahy-Chr10 9902665 9910455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0778 712 1282 Calmodulin-binding Proteins AT2G36910 37.326 2.70e-111 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0778 K05658 - gmx:100804664 1887.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1077 20 16967925 16978743 Ahy10g0778 10 9902665 9910455 hybridization