Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0700 ATGGATAAAAAAGAGAGTGATCAATCTGCAACAAGAGGGACAAGCACTCCATCACACACCAAGGTAGTAGCTGGTCCTTCTGTTCCTTCACCTCTCTTAAGAGATCATCAACATTCTCACCATTACATCCACTACCACCACCTACAACAAGAAGAATTTCACCAAAAACTTCACAACTTTTGGGACAATCAGTACCGTAAAATTGAACAAGCGGCCGATTTCAGGATCCACAACTTACCCTTGGCTAGAATCAAGAAGATCATGAAGGCTGATGAAAATGTAAAAATGATATCAGCAGAGGCTCCTATTATATTTTCCAAGGATTGTGAAATGTTCATCATGGAATTGACAATGAGGGCTTGGAATAATGCTGAAGAGAACAAAAGGAGAACACTTCAGAAGAATGACATTGCTGCTGCAGTCACAAAAACTGATGTGTTTGATTTTCATGTTGATGTTGTCCCTAGAGATGAAACCGTGGACCTTAGTTTATATGCTGGTATAAGAAGAGGTGGATGCAATAATAATATTGTTCCTTGCAACTATTATGTGCCACCTCAACATGTTATGGGTCCACCACCATATGGTCCTCCAAGAATGCCTTTGGTGGGAAGACATGTTCCTAATCAAGATAATACTGACGAGCAGCAAAATAGTGAAAATACTACTCATGCTGTGTGTCCAAAGGAGCAAAATCATTCTTCAGATTCAGATGAATGA 720 0.3972 MDKKESDQSATRGTSTPSHTKVVAGPSVPSPLLRDHQHSHHYIHYHHLQQEEFHQKLHNFWDNQYRKIEQAADFRIHNLPLARIKKIMKADENVKMISAEAPIIFSKDCEMFIMELTMRAWNNAEENKRRTLQKNDIAAAVTKTDVFDFHVDVVPRDETVDLSLYAGIRRGGCNNNIVPCNYYVPPQHVMGPPPYGPPRMPLVGRHVPNQDNTDEQQNSENTTHAVCPKEQNHSSDSDE* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0700 239 MobiDBLite consensus disorder prediction 209 230 - -
Ahy10g0700 239 SUPERFAMILY Histone-fold 54 149 IPR009072 GO:0046982
Ahy10g0700 239 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 25 235 - -
Ahy10g0700 239 Pfam Core histone H2A/H2B/H3/H4 58 141 IPR007125 GO:0003677
Ahy10g0700 239 MobiDBLite consensus disorder prediction 1 33 - -
Ahy10g0700 239 MobiDBLite consensus disorder prediction 193 239 - -
Ahy10g0700 239 Gene3D Histone, subunit A 40 156 IPR009072 GO:0046982
Ahy10g0700 239 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 25 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0700 Ahy-Chr10 7695341 7697517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0700 59 221 CCAAT-HAP5 Transcription Factor Family AT1G54830 52.941 2.03e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Ahy10g0700 Histone 1.20E-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0700 K08066 - fve:101311753 196.438