Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0642 ATGAAGACTATGATGATGGTGATGATTATGGTGTCTATAACCATGGCAGCACCTTCACCTTCACCTTCTCCTTCTTCTCCTTCAACATGCCCCATCGACTTTAGCTATGTTAAGAGAGTTCCATGGAACCCTTCAGCATGTGAGAATTTCCACTCTTTATCATCGAACTTGAGCAACTGTTGCACCTCGCTCTTATCTCTAATCGGAATAGGGTTCGCGCAGTACCTTAAAGCAACTACAAATTTCAACCTCCCAAACCTTGAAACCTCAACCTCATGCGTCCATGATTTCCAGTCTCAGCTCAATTCCTTATCTCTCCAAAACAACCTCGTTGACTTGTGCTTTGACCCTCACCAGTTCGTCATGTCCCGAAACGTCTGCGCAGGAATTGAAACCCTAAAAGATTGGGACAAGAAGCTTGGTCAAATCACGCCTCTTGATACTAGTTGCAAACAAGACCTCACTGATCTTTCGCTATGTGATGTGTGTCTTACTGCGGGGTTTCAGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAGTTTACTATTCTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACACACAGGGTGGTGGTTCTGGTGGGAAAAGTCACCAGGGTTTGGTTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGGGTTTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGAATTTGACTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACAGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCCGTCGTGGCAGTTAAGAGGATCTTGGAATCTGATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGCCAGAGGTTTTTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAGAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGCTGGCTTATCTTCACTATGGAGTCAAGCCTGCAATTTTTCATAGGGATATAAAAGCAACCAACATATTACTTGATGAAGACATGAGAGCCAGAGTTGCGGATTTCGGGCTTGCTAAACAAAGCAGGGAAGGCCAATCTCATCTCACTACAAGAGTAGCTGGAACTCATGGATATCTAGCTCCGGAATATGCTCTTTACGGTCAGCTTACAGAGAAAAGTGATGTGTATAGTTTTGGGGTTGTTGTTTTGGAGATAATGTGTGGGAGGAGAGCCCTTGACTTGTCTTCAGCAGGATCGCTAAAGGCATTCTTGATCACGGATTGGGCTTGGTCGTTGGTGAAATCAGGGAACATAGAAGAGGCATTGGATGCTTCTTTGTTGAAGGATGACAGCTTTGGAAGTTCAAATCCAAAGAGCATAATGGAAAGGTTTTTACTTGTGGGAATTCTATGCTCACATGTGATGGTTGCTCTGAGGCCAACAATTTCTGATGCATTGAAGATGCTGGAAGGTGATATTGAGGTTCCTCAAATCCCGGATCGGCCAATGCCGCTCGGACACCCTGCTACGTTTTACGGCGATGGCTGCAGCACTTTCAGCATATCTCCGGCCTTAAGCGGCCCCAAGTTGCAAACTGGAGACATGCTCAGGTCCATTGGTAAGAGCTGA 1953 0.4455 MKTMMMVMIMVSITMAAPSPSPSPSSPSTCPIDFSYVKRVPWNPSACENFHSLSSNLSNCCTSLLSLIGIGFAQYLKATTNFNLPNLETSTSCVHDFQSQLNSLSLQNNLVDLCFDPHQFVMSRNVCAGIETLKDWDKKLGQITPLDTSCKQDLTDLSLCDVCLTAGFQVQHKLVSIDGNASHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYTQGGGSGGKSHQGLVFGLTGAGVALLVMSCLLGVYVWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNTGSIWFKIDELEKATDNFSTKNFIGRGGFGLVFKGVLSDGSVVAVKRILESDFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVDDDDEKFNDRGSQRFLVYDYMPNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRRALDLSSAGSLKAFLITDWAWSLVKSGNIEEALDASLLKDDSFGSSNPKSIMERFLLVGILCSHVMVALRPTISDALKMLEGDIEVPQIPDRPMPLGHPATFYGDGCSTFSISPALSGPKLQTGDMLRSIGKS* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0642 650 CDD STKc_IRAK 311 599 - -
Ahy10g0642 650 ProSiteProfiles Protein kinase domain profile. 305 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0642 650 Pfam SPARK 25 188 IPR043891 -
Ahy10g0642 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Ahy10g0642 650 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Ahy10g0642 650 Gene3D Phosphorylase Kinase; domain 1 275 390 - -
Ahy10g0642 650 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 644 - -
Ahy10g0642 650 Pfam Protein kinase domain 306 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0642 650 Gene3D Transferase(Phosphotransferase) domain 1 391 605 - -
Ahy10g0642 650 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 644 - -
Ahy10g0642 650 SMART serkin_6 305 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0642 650 SUPERFAMILY Protein kinase-like (PK-like) 285 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0642 Ahy-Chr10 6442179 6444944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0642 26 645 Receptor kinase-like Gene Family AT1G11050 64.090 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Ahy10g0642 Pkinase 1.10E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0642 - - gmx:100806560 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0908 20 11712007 11714839 Ahy10g0642 10 6442179 6444944 hybridization
Ahy10g0642 10 6442179 6444944 Ahy13g4027 13 139717922 139721045 PCT
Ahy10g0642 10 6442179 6444944 Ahy3g3751 3 136903921 136906393 PCT