Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0599 ATGGAGGTACAGGGTAAGCGCTTGAAGCCACGCCTCGATCGCCGCAACGCCATGAAGAACATCACTTACAAAGTCCCCTCTTCTTTCACCCCTTCCTCCATTGACCTTCCTCCTTCTTTGAACCACCAAAAAAGCTTCAGGGTCAAGGGCATCGACGACGGCGAATTTGACCTCATCTTCCGCACTCTCGGTCTCTCTGGACCCGAAGACTTTTCTATTCCAACCGCAGCTTGGGAACAAGCCCAAAGGTCTCGCCTTTCTCCTTCCCCTGTCACCACCAAAAACATCATCAACCTCCAGGTTGTTGATGAAGGACATGAACACCAAGCCCCACTTCCAATTCCACCTAAAACTGAATCTGGGGTTGGCTTCAATGTCGATGTTAGGCTGAAAAATCTAAGCTTTCAGCAACTTGCTCAGCATAACGTAATTGGTGGTGATAGTGGGGGCATCAAGGGTGTTAGGCCTCCACCGGTGATGTTGCGGCCACCACTTGATGATGATGACAATGATGTTGATGCTGTGGATTCACCTTCGAGGGAACAAGATGAAAGGTACTTTGAAGAGAGTGGGGACCTTGATGTTTCTGATGATGATGACAGTGATGTTGCTAGTGGTGAAGTTTCCGATGATGTTGTTGACGAGTCAAATGTTCATAACGTGTCTCCAAATGGTTCTTTTAGGAGAACGTTTATGTCGTGGCAAAAGGGCGAGATTCTTGGTAAAGGCTCATTTGGAACGGTTTATGAAGGCTTTACCGATGATGGATTCTTTTTTGCGGTGAAGGAGGTATCTTTGTTGGATGAAGGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAACAGGAAATATATCTTCTGAGCCAATTTGAACATGAGAACATAGTTAGATATCTTGGCACAGACAAGGACAATACCATGCTATACATCTTTCTCGAGCTTGTAACAAAAGGATCATTGGCAAGTCTTTATAGAAAGTATCGTTTAAAGGATTCTCAGGTTTCGGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAACGTGGTTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGTGAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACTAAATTAAACGATGTTAAATCAAGCAAAGGTTCTCCATATTGGATGGCCCCTGAGGTTGTTAACTTACGAAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTGGAGATGTTAACACGGCAACCTCCTTATTCTCATTTAGAAGGAATGCAAGCGCTATTTCGGATTGGAAGGGGTGAAGCACCTCCAGTTCCTGAAACATTATCAAAAGATGCAAGAGATTTCATAATGAAATGCTTACAAGTGAATCCAAGTAAAAGGCCAACTGCTACTCAGCTGTTGGATCATCCATTTGTAAAGAGGCCACTTCTATCTCCCATAAGTCTTGTCTCTCCACGCATTAATCTTCTTCTGTCTTAA 1524 0.4403 MEVQGKRLKPRLDRRNAMKNITYKVPSSFTPSSIDLPPSLNHQKSFRVKGIDDGEFDLIFRTLGLSGPEDFSIPTAAWEQAQRSRLSPSPVTTKNIINLQVVDEGHEHQAPLPIPPKTESGVGFNVDVRLKNLSFQQLAQHNVIGGDSGGIKGVRPPPVMLRPPLDDDDNDVDAVDSPSREQDERYFEESGDLDVSDDDDSDVASGEVSDDVVDESNVHNVSPNGSFRRTFMSWQKGEILGKGSFGTVYEGFTDDGFFFAVKEVSLLDEGSQGKQSIFQLQQEIYLLSQFEHENIVRYLGTDKDNTMLYIFLELVTKGSLASLYRKYRLKDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGEAPPVPETLSKDARDFIMKCLQVNPSKRPTATQLLDHPFVKRPLLSPISLVSPRINLLLS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0599 507 SUPERFAMILY Protein kinase-like (PK-like) 234 496 IPR011009 -
Ahy10g0599 507 SMART serkin_6 234 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0599 507 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 5 97 - -
Ahy10g0599 507 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 5 97 - -
Ahy10g0599 507 Pfam Protein kinase domain 235 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0599 507 MobiDBLite consensus disorder prediction 190 208 - -
Ahy10g0599 507 ProSiteProfiles Protein kinase domain profile. 234 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0599 507 PRINTS Tyrosine kinase catalytic domain signature 347 365 IPR001245 GO:0004672|GO:0006468
Ahy10g0599 507 PRINTS Tyrosine kinase catalytic domain signature 413 435 IPR001245 GO:0004672|GO:0006468
Ahy10g0599 507 PRINTS Tyrosine kinase catalytic domain signature 456 478 IPR001245 GO:0004672|GO:0006468
Ahy10g0599 507 PRINTS Tyrosine kinase catalytic domain signature 312 325 IPR001245 GO:0004672|GO:0006468
Ahy10g0599 507 Gene3D Transferase(Phosphotransferase) domain 1 232 499 - -
Ahy10g0599 507 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 149 489 - -
Ahy10g0599 507 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 149 489 - -
Ahy10g0599 507 MobiDBLite consensus disorder prediction 175 189 - -
Ahy10g0599 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Ahy10g0599 507 MobiDBLite consensus disorder prediction 146 208 - -
Ahy10g0599 507 ProSitePatterns Protein kinases ATP-binding region signature. 240 262 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0599 Ahy-Chr10 6001191 6003862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0599 151 491 MAP Kinase Kinase Kinase AT4G08500 56.417 7.46e-133 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy10g0599 Pkinase 3.00E-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0599 - K13414 gmx:100806902 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0865 20 11120549 11123244 Ahy10g0599 10 6001191 6003862 hybridization
Ahy13g4199 13 141478400 141508016 Ahy10g0599 10 6001191 6003862 PCT
Ahy3g3928 3 138628340 138632598 Ahy10g0599 10 6001191 6003862 PCT