Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0589 ATGAATTTGGAGTGCATATCCAGAAAATGCATAAAGCCATCATCACCAACGCCTCCAAACCTTCAAATCTTCAACATGTCTCTTCTGGACCAGCTTTCCCCTAACATCCATGGCAACATCACCTTCTTCTACCCTCACAAAACTTCTGCTCGGGAATTCTCCGCCAAATCCCAACTCCTTCAGGACTCACTCTCTCAAATCTTGACACTCTTCTATCCTCTCGCCGCCCGCCTCCGAGACGCCGCCACCATCCACTGCAACGACCAAGGAGCCTTCTTCATCCAATCACGAACCCAAACACCTCTCTCTCAGATCCTCTCCCCCCCTAACTTCGATATCATCCAGAATCTTCTCCCTACCACCCACTCCGACTCCTTGCTTCTTGTCCGCTTTACCTTGTTCGGTTGCGGCGCCACCGCCATCACCATCTCCCTCACTCACAAGATCGCTGACTTCGCAGCCTTGATCACTCTCCTCAAGGCATGGACCGCCGCCTGCATTGGCGGAGACACCCAGCCGGTGGTCCCCGAACTCGCCATCGGATCTGCTCTCTTCCCTCCGAGAGAGATTCTTCCCGCCGGGATGTCAGCCTCCGTGAAGATCGCGGCGGAGAAGTTCACGACGAGGAGGCTGATTTTCGAGTCTTGGAAGGTAGAAGAGCTGAAGAAGAGGGTGAAAAGCGAGCTTCAGTTTGAGGCGTCGAGGGTTGAGGTGGTGCTTGGTCTCATTTGGAGATGCGCATTGTTAACTTCAAAACGTAAAACGCCTTCAACCTTGTTCCAGGCAGTGAACCTGCGACGACGAATGGAACCTCCGATTCCAGAGACGGCGTTGGGGAACTTGGTGTGGGCGTTTGCAGTGACTGTGGAGGAGGAGTGCGAGGTAGAGTTGCAGGTGGTAGTAAAGAAGATGAGGGATTGTTTGAAGGAATTCATGGAGAGGAAAGGCGAAAGATTGAATAATTCAGAAGGTAGGTGTGAGGTGGTGATGGAGGATTTGAAGGAGAGGGGTGAGATGTTGAAGAAGAGTGGTAGTGTGGTGTATAAGTGTTCGAGTTGGTGCAAGGTTGGATCATCACTGTATGAGGTTGATTTTGGGTGGGGGAAGCCGCTTTGGATGTGCAGCGTCAACAACATAGTGAGTAACACCGTTGCTTTGATGGATACAAGGGATGGGCATGGCGTCGAAGCTTTTGTCACCTTGGATCATCAACACATGGATTCCTTTCAACAATCTCAGGAACTCCTTCACTATGCTTTGCTTAATCCCCCTCTTCTGTAA 1281 0.5121 MNLECISRKCIKPSSPTPPNLQIFNMSLLDQLSPNIHGNITFFYPHKTSAREFSAKSQLLQDSLSQILTLFYPLAARLRDAATIHCNDQGAFFIQSRTQTPLSQILSPPNFDIIQNLLPTTHSDSLLLVRFTLFGCGATAITISLTHKIADFAALITLLKAWTAACIGGDTQPVVPELAIGSALFPPREILPAGMSASVKIAAEKFTTRRLIFESWKVEELKKRVKSELQFEASRVEVVLGLIWRCALLTSKRKTPSTLFQAVNLRRRMEPPIPETALGNLVWAFAVTVEEECEVELQVVVKKMRDCLKEFMERKGERLNNSEGRCEVVMEDLKERGEMLKKSGSVVYKCSSWCKVGSSLYEVDFGWGKPLWMCSVNNIVSNTVALMDTRDGHGVEAFVTLDHQHMDSFQQSQELLHYALLNPPLL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0589 426 Gene3D - 1 194 IPR023213 -
Ahy10g0589 426 Gene3D - 203 418 IPR023213 -
Ahy10g0589 426 PANTHER VINORINE SYNTHASE-RELATED 2 424 - -
Ahy10g0589 426 PANTHER F21J9.9 2 424 - -
Ahy10g0589 426 Pfam Transferase family 2 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0589 Ahy-Chr10 5874550 5876310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0589 1 411 Monolignol Biosynthesis Gene Families AT5G48930 24.612 3.32e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0589 - - aip:107620102 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0857 20 11043310 11044942 Ahy10g0589 10 5874550 5876310 hybridization