Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0583 ATGAAGGGTATGGCGAATGTATTGAGCGGGTTGAAACCCGTGATTCTAATGGTGTTGGTGCAGGTTGCATTCACTGCTGTCAATGTCTTCTACAAGCTTGCCATCAATGATGGAATGAGTGTTAAAGTTCTTACTGCTTATCGTCTCGCTTTTGGTGCTGCTTTCACTGTTCCACTTGCTCTTGTTTCCGAAAGGAACAAGAGACCAAAGATGACTTGGAAGGTGCTTTTCATGTCATTTCTTTGCGGCTTGTTTGGGGGAAGTTTGTTTCAGAACCTTTTCTATGAGGCGCTGGCTTTGACGTCAGCAACGTTTGTGTCTGCCATCTACAACCTCATACCAGGGATCACTTTTGTGTTGGCCATAACCTTCGGTTTTGAGAAACTGAAACTGGGGGGAGCAGCTGGAAAGGCCAAGGTGTTTGGAACCCTGATTGGAATTGGTGGGGCAATGGTGTTGACTTTTGTCAAAGGGGTTCAAATTAATATATGGCCTTTCCATGTCAACCTTTTGAAGAACCCATCACATGATCATAATACGCATACAAGTAGTAACGACTTGTTGGGGGTTGTGTGCGCCATTGCTAGTTGCTTCTCTTATGCTTCTTGGCTCATCATTCAGGCTAAGATGACCAAGGAATATCCAAGTCATAATTCAAGCACAGCTTTGATGCTTACAGCAGCAGCTATTCAAGCCACTGTTTTTGCTTTTTGTACTGAGAGGGATCTCAATCAATGGAAGCTTGGTTGGAATATCAGGCTTTTGGCTTCTGCTTATTCGGGAATTGTGGGGTCTGGAGTAGTGTGTCTTATCATAGCATGGTGCATACAAATGAGAGGGCCACTATTTGCCTCCATTTTCAACCCTCTCATGCTTGTGCTTGTGGCTGTTGCGGCTTCTTTTATGTTGGATGAGCAATTGTATCTTGGAAGTGTGATTGGAGCAATACTGATAGTGTGTGGACTATACATAGTTCTATGGGGAAAGAACAAAGAGATGAAAAAGGTAACTCAGTTGCTGCCATCTGAAATCATGCAATTACAGCAGCAGGATCAACAACAGACTATACAAGTTGTTACGTCCACGGCAGTTGTCAAATGTGAGCAACAACAATAA 1116 0.4355 MKGMANVLSGLKPVILMVLVQVAFTAVNVFYKLAINDGMSVKVLTAYRLAFGAAFTVPLALVSERNKRPKMTWKVLFMSFLCGLFGGSLFQNLFYEALALTSATFVSAIYNLIPGITFVLAITFGFEKLKLGGAAGKAKVFGTLIGIGGAMVLTFVKGVQINIWPFHVNLLKNPSHDHNTHTSSNDLLGVVCAIASCFSYASWLIIQAKMTKEYPSHNSSTALMLTAAAIQATVFAFCTERDLNQWKLGWNIRLLASAYSGIVGSGVVCLIIAWCIQMRGPLFASIFNPLMLVLVAVAASFMLDEQLYLGSVIGAILIVCGLYIVLWGKNKEMKKVTQLLPSEIMQLQQQDQQQTIQVVTSTAVVKCEQQQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0583 371 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Ahy10g0583 371 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Ahy10g0583 371 PANTHER WAT1-RELATED PROTEIN 12 352 - -
Ahy10g0583 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 331 - -
Ahy10g0583 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Ahy10g0583 371 PANTHER WAT1-RELATED PROTEIN 12 352 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0583 Ahy-Chr10 5822967 5824882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0583 11 353 Nodulin-like Gene Family AT1G25270 41.983 2.45e-96 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0583 - - gmx:100798755 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0852 20 10990340 10992192 Ahy10g0583 10 5822967 5824882 hybridization
Ahy13g4183 13 141314614 141316757 Ahy10g0583 10 5822967 5824882 PCT
Ahy10g0583 10 5822967 5824882 Ahy3g3906 3 138419153 138421233 PCT