Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0581 ATGACCACCAAGCCCAAGGGCAATGCCTTGCAGGGCTTGAAGCCCGTGATTCTTATGGTCATAGTTCAGATTGCATTCGCCGGTGTCAACATCCTCTACAAGCTCGCCGTTAATGATGGCATGAGCCTCAGAGTCACTGTCGCCTACCGCTTCATTTTCGCTACTGCTTTCATTGCTCCCTTTGCTCTCTTTTTCGAAAGGAAGAAGAGGGTGAAACTGACATGGATGGTACTATTTCAATCATTTCTATGCGGCTTATTTGGAGGAGCCTTAGCTCAGAATTTCTACCTGGAGGCTCTGGCTTTAACTTCTGCAACGTTTGCATCCGCCATGGCCAACCTCATACCTGCTATTACCTTTGTGATGGCCGTTTGCATAGGTTTGGAAAGATTGAATTTGGGATCAGCAGCAGGGAAGGCGAAAATAATCGGAACAATGGCCGGAATTGCAGGAGCAATGGTTCTGACTTTCGTGAAAGGCCCGGAAATCCAGATTGCATCGCATGTTAACCTTATGAATCACAGAAACAATAGTTCTATGGCGGCTCATGGCGGCGGTGGTAGAACGGTGTTGGGATCTGTGTGCGCGTTGGCGAGCGGGATCTCTTACGCGCTGTGGCTCATCATACAGACAAAGATGAGTGAGAGGTATCCAAGCTATTACTCCAGCACTGCGCTCATGTCTCTCTGGGCGGCGATCTTGTCCACGGCGTTCGCTCTTTCCGTCGAGAACGATTGGAGTCAGTGGAGGCTTGGTTGGAACATTAGGCTTCTGACGGTTGCTTATTCCGGCATGGTTGTTTCTGGAATGATGGTGGCTGTGATCTCCTGGTGCGTCCGCATGAGAGGGCCCTTGTTCGCCTCTGTTTTCAGCCCTCTCTTGCTCGTCATTGTCGCCGTGGCTAGCTCCACCGTCTTGAACGAGAAGCTGTACCTTGGAAGCTTCATCGGAGCGGTGTTGATTGTGTGTGGGTTATACGCTGTTCTTTGGGGGAAAAGCAAAGAGAGGAAGAAGATGAAGAATATGAGTCAATTACCACAATGCCCTCATGACGATGATGATGACACTCTACAAGTAATTGTGACCAGGACTAATTCTAAAGTAGGAGAAGATCGTAAAAGCAACAACAATGGACATGTGGATGATAACCAAGGTTCAATAGATCATGGTAATAATAATAAGGGAATAACAAGAGATCAAGAACAAGAAGAAAAACAAGATGATGAAGAGGGAATTTCTCCCAATGCAGAAGACATCATCCCTAGTGTAGTAATATAA 1278 0.4734 MTTKPKGNALQGLKPVILMVIVQIAFAGVNILYKLAVNDGMSLRVTVAYRFIFATAFIAPFALFFERKKRVKLTWMVLFQSFLCGLFGGALAQNFYLEALALTSATFASAMANLIPAITFVMAVCIGLERLNLGSAAGKAKIIGTMAGIAGAMVLTFVKGPEIQIASHVNLMNHRNNSSMAAHGGGGRTVLGSVCALASGISYALWLIIQTKMSERYPSYYSSTALMSLWAAILSTAFALSVENDWSQWRLGWNIRLLTVAYSGMVVSGMMVAVISWCVRMRGPLFASVFSPLLLVIVAVASSTVLNEKLYLGSFIGAVLIVCGLYAVLWGKSKERKKMKNMSQLPQCPHDDDDDTLQVIVTRTNSKVGEDRKSNNNGHVDDNQGSIDHGNNNKGITRDQEQEEKQDDEEGISPNAEDIIPSVVI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0581 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Ahy10g0581 425 MobiDBLite consensus disorder prediction 379 393 - -
Ahy10g0581 425 Pfam EamA-like transporter family 14 156 IPR000620 GO:0016020|GO:0016021
Ahy10g0581 425 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020|GO:0016021
Ahy10g0581 425 MobiDBLite consensus disorder prediction 364 425 - -
Ahy10g0581 425 PANTHER WAT1-RELATED PROTEIN 14 366 IPR030184 GO:0016021|GO:0022857
Ahy10g0581 425 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 335 - -
Ahy10g0581 425 PANTHER WAT1-RELATED PROTEIN 14 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0581 Ahy-Chr10 5791392 5793936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0581 13 354 Nodulin-like Gene Family AT1G25270 43.188 1.72e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0581 - - aip:107620100 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0850 20 10943953 10946397 Ahy10g0581 10 5791392 5793936 hybridization