Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0559 ATGGTGACTTCAACTTGCAAGGGTTCTTTTCTTGTTTGTGCAATTTTGGTGCTTGATTTGGTGCTTAAGGTCTCTGGCAATGCAGAAGGTGATGCCCTAAATGCATTGAAGAGCAACTTACAAGATCCTAACAATGTTCTTCAAAGCTGGGATGCCACCCTTGTCAATCCATGCACATGGTTTCATGTTACATGCAATAGTGATAATAGTGTGACCCGTGTTGATCTTGGAAATGCAGATCTATCGGGTACATTGGTTCCAAACCTTGGTAATCTACCAAATTTACAGTACCTGCGTCTCAACAATAACACCTTGTCAGGAGGCATTCCCATGTCTTTGACCGGGATCAATTCACTGCAAGTTCTTGATCTCTCAAACAACCAGCTAAAAGGAACTGTGCCAGTCAATGGTTCATTTTCATTGTTTACTCCGATCAGTTATCAAAATAATCCTGGCTTGATACAACCAAAGAATGCTCCTTCTGCGCCATTATCTCCTCCATCAGCACCTTCTTCAGGTAACAGTGCTACTGGAGCTATTGCTGGAGGAGTTGCTGCAGGTGCTGCCTTGTTGTTTGCAGCCCCTGCTATCGCACTTGCATATTGGCGAAGAAGGAAGCCTCAGGATCATTTCTTTGATGTCCCTGCTGAGGAGGATCCTGAAGTTCACCTAGGCCAGCTTAAAAGGTTTTCGCTGCGTGAGCTGCAAGTTGCAACAGATAACTTTAGTAACAAACATATTCTTGGTAGAGGTGGATTTGGGAAGGTATATAAAGGGCGTTTAGCTGATGGTAGTCTTGTAGCAGTAAAAAGGCTGAAAGAGGAGCGCACACAGGGTGGGGAGCTGCAATTTCAAACAGAAGTGGAAATGATCAGCATGGCCGTGCATCGCAATTTGCTTCGGCTCCGTGGTTTTTGCATGACACCTACTGAACGGTTGCTTGTGTATCCTTTCATGGTTAACGGAAGTGTGGCATCATGTTTACGAGAACGTAATGAATCTCAACCGCCACTTGACTGGCCAATACGCAAGTGTATTGCATTGGGAGCTGCTAGGGGGCTTGCTTATTTGCACGACCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCTGCAAATATATTATTGGATGAAGAATTTGAAGCAGTTGTTGGAGATTTTGGCTTAGCGAAACTTATGGATTACAAAGATACTCATGTTACCACTGCTGTACGTGGTACAATTGGGCATATAGCACCAGAGTACCTCTCAACTGGGAAGTCATCAGAGAAGACAGATGTTTTTGGATACGGTGTGATGCTTCTTGAACTAATAACCGGGCAGAGGGCTTTCGATCTGGCTCGACTTGCCAATGATGATGATGTCATGTTGCTTGATTGGGTTAAAGGGCTTCTTAAAGACAAGAAATTGGAAACACTGGTTGACGCGGATCTGCAGGGCAATTATAACGATGAGGAGGTAGAGCAGCTAATCCAAGTAGCGTTGCTATGCACACAAGGCTCCCCTATGGAAAGACCGAAGATGTCCGAGGTGGTTAGAATGCTAGAAGGCGACGGTTTGGCCGAAAAATGGGAGCAGTGGCAGAAAGAGGAGATGTTCCGTCAAGATTTTAACCACATCCATCACCCAAATGCAAATTGGATAGTAGACTCTACTTCTCACATCCAAGCAGATGAACTATCTGGTCCTAGATGA 1698 0.4464 MVTSTCKGSFLVCAILVLDLVLKVSGNAEGDALNALKSNLQDPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGTLVPNLGNLPNLQYLRLNNNTLSGGIPMSLTGINSLQVLDLSNNQLKGTVPVNGSFSLFTPISYQNNPGLIQPKNAPSAPLSPPSAPSSGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERNESQPPLDWPIRKCIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKKLETLVDADLQGNYNDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKEEMFRQDFNHIHHPNANWIVDSTSHIQADELSGPR* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0559 565 Gene3D Phosphorylase Kinase; domain 1 211 318 - -
Ahy10g0559 565 MobiDBLite consensus disorder prediction 152 175 - -
Ahy10g0559 565 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Ahy10g0559 565 Gene3D Ribonuclease Inhibitor 26 149 IPR032675 -
Ahy10g0559 565 SMART serkin_6 242 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0559 565 ProSitePatterns Protein kinases ATP-binding region signature. 248 270 IPR017441 GO:0005524
Ahy10g0559 565 Gene3D Transferase(Phosphotransferase) domain 1 319 536 - -
Ahy10g0559 565 SUPERFAMILY Protein kinase-like (PK-like) 221 517 IPR011009 -
Ahy10g0559 565 Pfam Protein kinase domain 243 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy10g0559 565 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 100 - -
Ahy10g0559 565 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 97 565 - -
Ahy10g0559 565 PANTHER BNAA08G11770D PROTEIN 12 100 IPR031048 GO:0004675|GO:0005102|GO:0006468
Ahy10g0559 565 PANTHER BNAA08G11770D PROTEIN 97 565 IPR031048 GO:0004675|GO:0005102|GO:0006468
Ahy10g0559 565 SUPERFAMILY L domain-like 29 135 - -
Ahy10g0559 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Ahy10g0559 565 ProSiteProfiles Protein kinase domain profile. 242 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0559 Ahy-Chr10 5528247 5534088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0559 7 565 Receptor kinase-like Gene Family AT1G71830 71.040 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy10g0559 Pkinase 5.90E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0559 K13416 - gmx:100800522 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0831 20 10672192 10678105 Ahy10g0559 10 5528247 5534088 hybridization
Ahy13g4162 13 141112166 141117273 Ahy10g0559 10 5528247 5534088 PCT
Ahy3g3884 3 138202938 138207622 Ahy10g0559 10 5528247 5534088 PCT
Ahy10g0559 10 5528247 5534088 Ahy13g4162 13 141112166 141117273 PCT
Ahy10g0559 10 5528247 5534088 Ahy3g3884 3 138202938 138207622 PCT